1yw0
From Proteopedia
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- | {{Seed}} | ||
- | [[Image:1yw0.png|left|200px]] | ||
- | < | + | ==Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.== |
- | + | <StructureSection load='1yw0' size='340' side='right'caption='[[1yw0]], [[Resolution|resolution]] 2.70Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1yw0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris_str._ATCC_33913 Xanthomonas campestris pv. campestris str. ATCC 33913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YW0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YW0 FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> | |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yw0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yw0 OCA], [https://pdbe.org/1yw0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yw0 RCSB], [https://www.ebi.ac.uk/pdbsum/1yw0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yw0 ProSAT], [https://www.topsan.org/Proteins/NESGC/1yw0 TOPSAN]</span></td></tr> | |
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/T23O_XANCP T23O_XANCP] Catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring.[HAMAP-Rule:MF_01972]<ref>PMID:17197414</ref> <ref>PMID:18783250</ref> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yw0_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yw0 ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
- | == | + | ==See Also== |
- | + | *[[Dioxygenase 3D structures|Dioxygenase 3D structures]] | |
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
- | [[Category: | + | </StructureSection> |
- | [[Category: Xanthomonas campestris pv. campestris str. | + | [[Category: Large Structures]] |
- | [[Category: Abashidze | + | [[Category: Xanthomonas campestris pv. campestris str. ATCC 33913]] |
- | [[Category: Aton | + | [[Category: Abashidze M]] |
- | [[Category: Ciano | + | [[Category: Aton TB]] |
- | [[Category: Forouhar | + | [[Category: Ciano M]] |
- | [[Category: Hunt | + | [[Category: Forouhar F]] |
- | [[Category: Kuzin | + | [[Category: Hunt JF]] |
- | [[Category: Montelione | + | [[Category: Kuzin A]] |
- | + | [[Category: Montelione GT]] | |
- | [[Category: Tong | + | [[Category: Tong L]] |
- | [[Category: Vorobiev | + | [[Category: Vorobiev SM]] |
- | [[Category: Xiao | + | [[Category: Xiao R]] |
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Current revision
Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.
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