1jd1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1jd1.png|left|200px]]
 
-
<!--
+
==Crystal Structure of YEO7_yeast==
-
The line below this paragraph, containing "STRUCTURE_1jd1", creates the "Structure Box" on the page.
+
<StructureSection load='1jd1' size='340' side='right'caption='[[1jd1]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1jd1]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JD1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JD1 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jd1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jd1 OCA], [https://pdbe.org/1jd1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jd1 RCSB], [https://www.ebi.ac.uk/pdbsum/1jd1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jd1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1jd1 TOPSAN]</span></td></tr>
-
{{STRUCTURE_1jd1| PDB=1jd1 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal Structure of YEO7_yeast===
+
[https://www.uniprot.org/uniprot/HMF1_YEAST HMF1_YEAST]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1JD1 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JD1 OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jd/1jd1_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
X-ray structure of Saccharomyces cerevisiae homologous mitochondrial matrix factor 1 (Hmf1)., Deaconescu AM, Roll-Mecak A, Bonanno JB, Gerchman SE, Kycia H, Studier FW, Burley SK, Proteins. 2002 Aug 1;48(2):431-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12112709 12112709]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jd1 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley SK]]
-
[[Category: Deaconescu, A M.]]
+
[[Category: Deaconescu AM]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Translation inhibitor]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:08:53 2008''
+

Current revision

Crystal Structure of YEO7_yeast

PDB ID 1jd1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools