This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2jz8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:07, 29 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2jz8.png|left|200px]]
 
-
<!--
+
==Solution NMR structure of BH09830 from Bartonella henselae modeled with one Zn+2 bound. Northeast Structural Genomics Consortium target BnR55==
-
The line below this paragraph, containing "STRUCTURE_2jz8", creates the "Structure Box" on the page.
+
<StructureSection load='2jz8' size='340' side='right'caption='[[2jz8]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2jz8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bartonella_henselae_str._Houston-1 Bartonella henselae str. Houston-1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JZ8 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2jz8| PDB=2jz8 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jz8 OCA], [https://pdbe.org/2jz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2jz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jz8 ProSAT], [https://www.topsan.org/Proteins/NESGC/2jz8 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Solution NMR structure of BH09830 from Bartonella henselae modeled with one Zn+2 bound. Northeast Structural Genomics Consortium target BnR55===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A0A0H3M3K8_BARHE A0A0H3M3K8_BARHE]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2JZ8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JZ8 OCA].
+
Check<jmol>
-
[[Category: Bacteria]]
+
<jmolCheckbox>
-
[[Category: Acton, T B.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/2jz8_consurf.spt"</scriptWhenChecked>
-
[[Category: Baran, M C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Cort, J R.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Ding, K.]]
+
</jmolCheckbox>
-
[[Category: Janjua, H.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jz8 ConSurf].
-
[[Category: Kennedy, M A.]]
+
<div style="clear:both"></div>
-
[[Category: Liu, J.]]
+
__TOC__
-
[[Category: Montelione, G T.]]
+
</StructureSection>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Bartonella henselae str. Houston-1]]
-
[[Category: Owens, L.]]
+
[[Category: Large Structures]]
-
[[Category: Rost, B.]]
+
[[Category: Acton TB]]
-
[[Category: Swapna, G V.T.]]
+
[[Category: Baran MC]]
-
[[Category: Wang, D.]]
+
[[Category: Cort JR]]
-
[[Category: Xiao, R.]]
+
[[Category: Ding K]]
-
[[Category: Nesg]]
+
[[Category: Janjua H]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Kennedy MA]]
-
[[Category: Protein structure initiative]]
+
[[Category: Liu J]]
-
[[Category: Psi-2]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Owens L]]
-
[[Category: Unknown function]]
+
[[Category: Rost B]]
-
[[Category: Zinc binding]]
+
[[Category: Swapna GVT]]
-
 
+
[[Category: Wang D]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:41:14 2008''
+
[[Category: Xiao R]]

Current revision

Solution NMR structure of BH09830 from Bartonella henselae modeled with one Zn+2 bound. Northeast Structural Genomics Consortium target BnR55

PDB ID 2jz8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools