2ipq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:04, 21 November 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ipq.png|left|200px]]
 
-
<!--
+
==Crystal structure of C-terminal domain of Salmonella Enterica protein STY4665, PFAM DUF1528==
-
The line below this paragraph, containing "STRUCTURE_2ipq", creates the "Structure Box" on the page.
+
<StructureSection load='2ipq' size='340' side='right'caption='[[2ipq]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ipq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhi Salmonella enterica subsp. enterica serovar Typhi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IPQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IPQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2ipq| PDB=2ipq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ipq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ipq OCA], [https://pdbe.org/2ipq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ipq RCSB], [https://www.ebi.ac.uk/pdbsum/2ipq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ipq ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ipq TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of C-terminal domain of Salmonella Enterica protein STY4665, PFAM DUF1528===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8Z1C5_SALTI Q8Z1C5_SALTI]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2IPQ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhi Salmonella typhi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IPQ OCA].
+
Check<jmol>
-
[[Category: Salmonella typhi]]
+
<jmolCheckbox>
-
[[Category: Almo, S C.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/2ipq_consurf.spt"</scriptWhenChecked>
-
[[Category: Bain, K T.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Bonanno, J B.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Burley, S K.]]
+
</jmolCheckbox>
-
[[Category: Gilmore, J.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ipq ConSurf].
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
<div style="clear:both"></div>
-
[[Category: Ramagopal, U A.]]
+
__TOC__
-
[[Category: Reyes, C.]]
+
</StructureSection>
-
[[Category: Sauder, J M.]]
+
[[Category: Large Structures]]
-
[[Category: Toro, R.]]
+
[[Category: Salmonella enterica subsp. enterica serovar Typhi]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Almo SC]]
-
[[Category: Nysgxrc]]
+
[[Category: Bain KT]]
-
[[Category: Protein structure initiative]]
+
[[Category: Bonanno JB]]
-
[[Category: Psi]]
+
[[Category: Burley SK]]
-
[[Category: Structural genomic]]
+
[[Category: Gilmore J]]
-
[[Category: Unknown function]]
+
[[Category: Ramagopal UA]]
-
 
+
[[Category: Reyes C]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:50:14 2008''
+
[[Category: Sauder JM]]
 +
[[Category: Toro R]]

Current revision

Crystal structure of C-terminal domain of Salmonella Enterica protein STY4665, PFAM DUF1528

PDB ID 2ipq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools