This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3bcv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:31, 5 January 2022) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3bcv.png|left|200px]]
 
-
<!--
+
==Crystal structure of a putative glycosyltransferase from Bacteroides fragilis==
-
The line below this paragraph, containing "STRUCTURE_3bcv", creates the "Structure Box" on the page.
+
<StructureSection load='3bcv' size='340' side='right'caption='[[3bcv]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BCV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bcv OCA], [https://pdbe.org/3bcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bcv RCSB], [https://www.ebi.ac.uk/pdbsum/3bcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bcv ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bcv TOPSAN]</span></td></tr>
-
-->
+
</table>
-
{{STRUCTURE_3bcv| PDB=3bcv | SCENE= }}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
===Crystal structure of a putative glycosyltransferase from Bacteroides fragilis===
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bc/3bcv_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
3BCV is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BCV OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bacteroides fragilis nctc 9343]]
+
</jmolCheckbox>
-
[[Category: Burley, S K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bcv ConSurf].
-
[[Category: Kumaran, D.]]
+
<div style="clear:both"></div>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
__TOC__
-
[[Category: Palani, K.]]
+
</StructureSection>
-
[[Category: Swaminathan, S.]]
+
[[Category: Large Structures]]
-
[[Category: 12059a]]
+
[[Category: Burley SK]]
-
[[Category: Glycosyltransferase]]
+
[[Category: Kumaran D]]
-
[[Category: New york structural genomix research consortium]]
+
[[Category: Palani K]]
-
[[Category: Nysgxrc]]
+
[[Category: Swaminathan S]]
-
[[Category: Protein structure initiative ii]]
+
-
[[Category: Psi-ii]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:56:50 2008''
+

Current revision

Crystal structure of a putative glycosyltransferase from Bacteroides fragilis

PDB ID 3bcv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bcv"
Personal tools