3d0w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:56, 30 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3d0w.png|left|200px]]
 
-
<!--
+
==Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326==
-
The line below this paragraph, containing "STRUCTURE_3d0w", creates the "Structure Box" on the page.
+
<StructureSection load='3d0w' size='340' side='right'caption='[[3d0w]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3d0w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D0W FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3d0w| PDB=3d0w | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d0w OCA], [https://pdbe.org/3d0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d0w RCSB], [https://www.ebi.ac.uk/pdbsum/3d0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d0w ProSAT], [https://www.topsan.org/Proteins/NESGC/3d0w TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YFLH_BACSU YFLH_BACSU]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3D0W is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0W OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/3d0w_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d0w ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Acton, T B.]]
+
[[Category: Large Structures]]
-
[[Category: Baran, M C.]]
+
[[Category: Acton TB]]
-
[[Category: Fang, Y.]]
+
[[Category: Baran MC]]
-
[[Category: Forouhar, F.]]
+
[[Category: Fang Y]]
-
[[Category: Hunt, J F.]]
+
[[Category: Forouhar F]]
-
[[Category: Kuzin, A P.]]
+
[[Category: Hunt JF]]
-
[[Category: Liu, J.]]
+
[[Category: Kuzin AP]]
-
[[Category: Ma, L-C.]]
+
[[Category: Liu J]]
-
[[Category: Min, S.]]
+
[[Category: Ma L-C]]
-
[[Category: Montelione, G T.]]
+
[[Category: Min S]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Montelione GT]]
-
[[Category: Neely, H.]]
+
[[Category: Neely H]]
-
[[Category: Owens, L.]]
+
[[Category: Owens L]]
-
[[Category: Rost, B.]]
+
[[Category: Rost B]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Seetharaman J]]
-
[[Category: Tong, L.]]
+
[[Category: Tong L]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao R]]
-
[[Category: Zhao, L.]]
+
[[Category: Zhao L]]
-
[[Category: Bacillus subtili]]
+
-
[[Category: Gram-positive bacterium]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+
-
[[Category: Yflh]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:58:17 2008''
+

Current revision

Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326

PDB ID 3d0w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools