2pif

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:18, 21 November 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2pif.png|left|200px]]
 
-
<!--
+
==Crystal structure of UPF0317 protein PSPTO_5379 from Pseudomonas syringae pv. tomato. NorthEast Structural Genomics target PsR181==
-
The line below this paragraph, containing "STRUCTURE_2pif", creates the "Structure Box" on the page.
+
<StructureSection load='2pif' size='340' side='right'caption='[[2pif]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2pif]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._DC3000 Pseudomonas syringae pv. tomato str. DC3000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PIF FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_2pif| PDB=2pif | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pif OCA], [https://pdbe.org/2pif PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pif RCSB], [https://www.ebi.ac.uk/pdbsum/2pif PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pif ProSAT], [https://www.topsan.org/Proteins/NESGC/2pif TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of UPF0317 protein PSPTO_5379 from Pseudomonas syringae pv. tomato. NorthEast Structural Genomics target PsR181===
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
2PIF is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato Pseudomonas syringae pv. tomato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIF OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/2pif_consurf.spt"</scriptWhenChecked>
-
[[Category: Pseudomonas syringae pv. tomato]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Abashidze, M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Acton, T B.]]
+
</jmolCheckbox>
-
[[Category: Baran, M C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pif ConSurf].
-
[[Category: Cunningham, K.]]
+
<div style="clear:both"></div>
-
[[Category: Fang, Y.]]
+
__TOC__
-
[[Category: Forouhar, F.]]
+
</StructureSection>
-
[[Category: Hunt, J F.]]
+
[[Category: Large Structures]]
-
[[Category: Liu, J.]]
+
[[Category: Pseudomonas syringae pv. tomato str. DC3000]]
-
[[Category: Ma, L-C.]]
+
[[Category: Abashidze M]]
-
[[Category: Montelione, G T.]]
+
[[Category: Acton TB]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Baran MC]]
-
[[Category: Rost, B.]]
+
[[Category: Cunningham K]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Fang Y]]
-
[[Category: Tong, L.]]
+
[[Category: Forouhar F]]
-
[[Category: Wang, D.]]
+
[[Category: Hunt JF]]
-
[[Category: Xia, R.]]
+
[[Category: Liu J]]
-
[[Category: Nesg]]
+
[[Category: Ma L-C]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Montelione GT]]
-
[[Category: Protein structure initiative]]
+
[[Category: Rost B]]
-
[[Category: Psi-2]]
+
[[Category: Seetharaman J]]
-
[[Category: Structural genomic]]
+
[[Category: Tong L]]
-
[[Category: Upf0317 family]]
+
[[Category: Wang D]]
-
 
+
[[Category: Xia R]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:31:14 2008''
+

Current revision

Crystal structure of UPF0317 protein PSPTO_5379 from Pseudomonas syringae pv. tomato. NorthEast Structural Genomics target PsR181

PDB ID 2pif

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pif"
Personal tools