3egl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:34, 26 March 2025) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3egl.png|left|200px]]
 
-
<!--
+
==Crystal Structure of DegV Family Protein Cg2579 from Corynebacterium glutamicum==
-
The line below this paragraph, containing "STRUCTURE_3egl", creates the "Structure Box" on the page.
+
<StructureSection load='3egl' size='340' side='right'caption='[[3egl]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3egl]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EGL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EGL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.41&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr>
-
{{STRUCTURE_3egl| PDB=3egl | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3egl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3egl OCA], [https://pdbe.org/3egl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3egl RCSB], [https://www.ebi.ac.uk/pdbsum/3egl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3egl ProSAT], [https://www.topsan.org/Proteins/MCSG/3egl TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of DegV Family Protein Cg2579 from Corynebacterium glutamicum===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y2349_CORGL Y2349_CORGL] Binds long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.[REFERENCE:3]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3EGL is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum_atcc_13032 Corynebacterium glutamicum atcc 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EGL OCA].
+
Check<jmol>
-
[[Category: Corynebacterium glutamicum atcc 13032]]
+
<jmolCheckbox>
-
[[Category: Abdullah, J.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eg/3egl_consurf.spt"</scriptWhenChecked>
-
[[Category: Joachimiak, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Kim, Y.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Tesar, C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3egl ConSurf].
-
[[Category: Alpha-beta-alpha sandwich]]
+
<div style="clear:both"></div>
-
[[Category: Mcsg]]
+
__TOC__
-
[[Category: Methylated lysine]]
+
</StructureSection>
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Corynebacterium glutamicum ATCC 13032]]
-
[[Category: Protein structure initiative]]
+
[[Category: Large Structures]]
-
[[Category: Psi-2]]
+
[[Category: Abdullah J]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Unknown function]]
+
[[Category: Kim Y]]
-
 
+
[[Category: Tesar C]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:08:49 2008''
+

Current revision

Crystal Structure of DegV Family Protein Cg2579 from Corynebacterium glutamicum

PDB ID 3egl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools