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1dus

From Proteopedia

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{{Seed}}
 
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[[Image:1dus.png|left|200px]]
 
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<!--
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==MJ0882-A hypothetical protein from M. jannaschii==
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The line below this paragraph, containing "STRUCTURE_1dus", creates the "Structure Box" on the page.
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<StructureSection load='1dus' size='340' side='right'caption='[[1dus]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1dus]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DUS FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1dus| PDB=1dus | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dus FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dus OCA], [https://pdbe.org/1dus PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dus RCSB], [https://www.ebi.ac.uk/pdbsum/1dus PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dus ProSAT], [https://www.topsan.org/Proteins/BSGC/1dus TOPSAN]</span></td></tr>
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</table>
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===MJ0882-A hypothetical protein from M. jannaschii===
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== Function ==
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[https://www.uniprot.org/uniprot/Y882_METJA Y882_METJA] Probable methyltransferase that uses S-adenosylmethionine as the methyl donor. Binds neither NAD nor NADP in vitro.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_12836702}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 12836702 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/1dus_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_12836702}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1DUS is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUS OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dus ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Structure-based experimental confirmation of biochemical function to a methyltransferase, MJ0882, from hyperthermophile Methanococcus jannaschii., Huang L, Hung L, Odell M, Yokota H, Kim R, Kim SH, J Struct Funct Genomics. 2002;2(3):121-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12836702 12836702]
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Methanocaldococcus jannaschii]]
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[[Category: BSGC, Berkeley Structural Genomics Center.]]
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[[Category: Huang L]]
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[[Category: Huang, L.]]
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[[Category: Hung L]]
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[[Category: Hung, L.]]
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[[Category: Kim R]]
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[[Category: Kim, R.]]
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[[Category: Kim SH]]
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[[Category: Kim, S H.]]
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[[Category: Berkeley structural genomics center]]
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[[Category: Bsgc structure funded by nih]]
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[[Category: Hypothetical protein]]
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[[Category: Methanococcus jannaschii]]
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[[Category: Protein structure initiative]]
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[[Category: Psi]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:35:57 2008''
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Current revision

MJ0882-A hypothetical protein from M. jannaschii

PDB ID 1dus

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