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3df8

From Proteopedia

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{{Seed}}
 
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[[Image:3df8.png|left|200px]]
 
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==The crystal structure of a possible HxlR family transcriptional factor from Thermoplasma volcanium GSS1==
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The line below this paragraph, containing "STRUCTURE_3df8", creates the "Structure Box" on the page.
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<StructureSection load='3df8' size='340' side='right'caption='[[3df8]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3df8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_51530 Atcc 51530]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DF8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
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-->
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3df8| PDB=3df8 | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TV1295, TVG1336486 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=50339 ATCC 51530])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3df8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3df8 OCA], [https://pdbe.org/3df8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3df8 RCSB], [https://www.ebi.ac.uk/pdbsum/3df8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3df8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3df8 TOPSAN]</span></td></tr>
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===The crystal structure of a possible HxlR family transcriptional factor from Thermoplasma volcanium GSS1===
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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3DF8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_volcanium Thermoplasma volcanium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF8 OCA].
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<jmolCheckbox>
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[[Category: Thermoplasma volcanium]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/3df8_consurf.spt"</scriptWhenChecked>
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[[Category: Joachimiak, A.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Moy, S.]]
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</jmolCheckbox>
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[[Category: Tan, K.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3df8 ConSurf].
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[[Category: Tesar, C.]]
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Atcc 51530]]
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[[Category: Large Structures]]
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[[Category: Joachimiak, A]]
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[[Category: Structural genomic]]
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[[Category: Moy, S]]
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[[Category: Tan, K]]
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[[Category: Tesar, C]]
[[Category: Apc89000]]
[[Category: Apc89000]]
[[Category: Hxlr]]
[[Category: Hxlr]]
[[Category: Mcsg]]
[[Category: Mcsg]]
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[[Category: Midwest center for structural genomic]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Protein structure initiative]]
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[[Category: Transcription]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Transcriptional factor]]
[[Category: Transcriptional factor]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:51:48 2008''
 

Current revision

The crystal structure of a possible HxlR family transcriptional factor from Thermoplasma volcanium GSS1

PDB ID 3df8

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