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1sbz

From Proteopedia

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{{Seed}}
 
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[[Image:1sbz.png|left|200px]]
 
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<!--
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==Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7==
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The line below this paragraph, containing "STRUCTURE_1sbz", creates the "Structure Box" on the page.
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<StructureSection load='1sbz' size='340' side='right'caption='[[1sbz]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1sbz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SBZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SBZ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1sbz| PDB=1sbz | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sbz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sbz OCA], [https://pdbe.org/1sbz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sbz RCSB], [https://www.ebi.ac.uk/pdbsum/1sbz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sbz ProSAT], [https://www.topsan.org/Proteins/BSGI/1sbz TOPSAN]</span></td></tr>
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</table>
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===Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7===
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== Function ==
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[https://www.uniprot.org/uniprot/PADL_ECO57 PADL_ECO57] Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions (PubMed:15979273). Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase (By similarity).[HAMAP-Rule:MF_01986]<ref>PMID:15979273</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_15459342}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 15459342 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sb/1sbz_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_15459342}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1SBZ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SBZ OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sbz ConSurf].
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<div style="clear:both"></div>
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==Reference==
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== References ==
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Crystal structure of a dodecameric FMN-dependent UbiX-like decarboxylase (Pad1) from Escherichia coli O157: H7., Rangarajan ES, Li Y, Iannuzzi P, Tocilj A, Hung LW, Matte A, Cygler M, Protein Sci. 2004 Nov;13(11):3006-16. Epub 2004 Sep 30. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15459342 15459342]
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<references/>
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[[Category: Escherichia coli]]
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__TOC__
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[[Category: BSGI, Montreal-Kingston Bacterial Structural Genomics Initiative.]]
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</StructureSection>
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[[Category: Cygler, M.]]
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[[Category: Escherichia coli O157:H7]]
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[[Category: Hung, L W.]]
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[[Category: Large Structures]]
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[[Category: Iannuzzi, P.]]
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[[Category: Cygler M]]
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[[Category: Li, Y.]]
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[[Category: Hung L-W]]
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[[Category: Matte, A.]]
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[[Category: Iannuzzi P]]
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[[Category: Rangarajan, E S.]]
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[[Category: Li Y]]
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[[Category: Tocilj, A.]]
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[[Category: Matte A]]
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[[Category: Bsgi]]
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[[Category: Rangarajan ES]]
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[[Category: Fmn binding]]
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[[Category: Tocilj A]]
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[[Category: Montreal-kingston bacterial structural genomics initiative]]
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[[Category: Pad1]]
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[[Category: Structural genomic]]
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[[Category: Ubix]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:08:17 2008''
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Current revision

Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7

PDB ID 1sbz

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