1x2r

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{{Seed}}
 
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[[Image:1x2r.png|left|200px]]
 
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==Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2==
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The line below this paragraph, containing "STRUCTURE_1x2r", creates the "Structure Box" on the page.
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<StructureSection load='1x2r' size='340' side='right'caption='[[1x2r]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1x2r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X2R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X2R FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_1x2r| PDB=1x2r | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x2r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x2r OCA], [https://pdbe.org/1x2r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x2r RCSB], [https://www.ebi.ac.uk/pdbsum/1x2r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x2r ProSAT], [https://www.topsan.org/Proteins/RSGI/1x2r TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/KEAP1_MOUSE KEAP1_MOUSE] Retains NFE2L2/NRF2 in the cytosol. Functions as substrate adapter protein for the E3 ubiquitin ligase complex formed by CUL3 and RBX1. Targets NFE2L2/NRF2 for ubiquitination and degradation by the proteasome, thus resulting in the suppression of its transcriptional activity and the repression of antioxidant response element-mediated detoxifying enzyme gene expression. May also retain BPTF in the cytosol. Targets PGAM5 for ubiquitination and degradation by the proteasome (By similarity).<ref>PMID:9887101</ref> <ref>PMID:12682069</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x2/1x2r_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x2r ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Nrf2 regulates the cellular oxidative stress response, whereas Keap1 represses Nrf2 through its molecular interaction. To elucidate the molecular mechanism of the Keap1 and Nrf2 interaction, we resolved the six-bladed beta propeller crystal structure of the Kelch/DGR and CTR domains of mouse Keap1 and revealed that extensive inter- and intrablade hydrogen bonds maintain the structural integrity and proper association of Keap1 with Nrf2. A peptide containing the ETGE motif of Nrf2 binds the beta propeller of Keap1 at the entrance of the central cavity on the bottom side via electrostatic interactions with conserved arginine residues. We found a somatic mutation and a gene variation in human lung cancer cells that change glycine to cysteine in the DGR domain, introducing local conformational changes that reduce Keap1's affinity for Nrf2. These results provide a structural basis for the loss of Keap1 function and gain of Nrf2 function.
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===Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2===
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Structural basis for defects of Keap1 activity provoked by its point mutations in lung cancer.,Padmanabhan B, Tong KI, Ohta T, Nakamura Y, Scharlock M, Ohtsuji M, Kang MI, Kobayashi A, Yokoyama S, Yamamoto M Mol Cell. 2006 Mar 3;21(5):689-700. PMID:16507366<ref>PMID:16507366</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1x2r" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_16507366}}, adds the Publication Abstract to the page
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*[[Kelch-like protein|Kelch-like protein]]
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(as it appears on PubMed at http://www.pubmed.gov), where 16507366 is the PubMed ID number.
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*[[Kelch-like protein 3D structures|Kelch-like protein 3D structures]]
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== References ==
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{{ABSTRACT_PUBMED_16507366}}
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<references/>
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__TOC__
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==About this Structure==
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</StructureSection>
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1X2R is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X2R OCA].
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[[Category: Large Structures]]
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==Reference==
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Structural basis for defects of Keap1 activity provoked by its point mutations in lung cancer., Padmanabhan B, Tong KI, Ohta T, Nakamura Y, Scharlock M, Ohtsuji M, Kang MI, Kobayashi A, Yokoyama S, Yamamoto M, Mol Cell. 2006 Mar 3;21(5):689-700. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16507366 16507366]
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[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Kang, M I.]]
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[[Category: Kang M-I]]
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[[Category: Kobayashi, A.]]
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[[Category: Kobayashi A]]
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[[Category: Nakamura, Y.]]
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[[Category: Nakamura Y]]
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[[Category: Ohta, T.]]
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[[Category: Ohta T]]
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[[Category: Ohtsuji, M.]]
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[[Category: Ohtsuji M]]
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[[Category: Padmanabhan, B.]]
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[[Category: Padmanabhan B]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Scharlock M]]
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[[Category: Scharlock, M.]]
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[[Category: Tong KI]]
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[[Category: Tong, K I.]]
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[[Category: Yamamoto M]]
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[[Category: Yamamoto, M.]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S.]]
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[[Category: Beta propeller]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Riken structural genomics/proteomics initiative]]
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[[Category: Rsgi]]
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[[Category: Structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:01:32 2008''
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Current revision

Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2

PDB ID 1x2r

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