This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1q1l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:00, 17 April 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1q1l.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Chorismate Synthase==
-
The line below this paragraph, containing "STRUCTURE_1q1l", creates the "Structure Box" on the page.
+
<StructureSection load='1q1l' size='340' side='right'caption='[[1q1l]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1q1l]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q1L FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1q1l| PDB=1q1l | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q1l OCA], [https://pdbe.org/1q1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q1l RCSB], [https://www.ebi.ac.uk/pdbsum/1q1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q1l ProSAT], [https://www.topsan.org/Proteins/MCSG/1q1l TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AROC_AQUAE AROC_AQUAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q1/1q1l_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q1l ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Chorismate Synthase===
+
==See Also==
-
 
+
*[[Chorismate synthase|Chorismate synthase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1Q1L is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q1L OCA].
+
-
 
+
-
==Reference==
+
-
Crystal structure of chorismate synthase from Aquifex aeolicus reveals a novel beta alpha beta sandwich topology., Viola CM, Saridakis V, Christendat D, Proteins. 2004 Jan 1;54(1):166-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14705034 14705034]
+
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
-
[[Category: Chorismate synthase]]
+
[[Category: Large Structures]]
-
[[Category: Christendat, D.]]
+
[[Category: Christendat D]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Saridakis V]]
-
[[Category: Saridakis, V.]]
+
[[Category: Viola CM]]
-
[[Category: Viola, C M.]]
+
-
[[Category: Beta alpha beta sandwich]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:03:02 2008''
+

Current revision

Crystal Structure of Chorismate Synthase

PDB ID 1q1l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1q1l"
Personal tools