3f2z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:48, 17 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3f2z.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B==
-
The line below this paragraph, containing "STRUCTURE_3f2z", creates the "Structure Box" on the page.
+
<StructureSection load='3f2z' size='340' side='right'caption='[[3f2z]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3f2z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F2Z FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3f2z| PDB=3f2z | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2z OCA], [https://pdbe.org/3f2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f2z RCSB], [https://www.ebi.ac.uk/pdbsum/3f2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2z ProSAT], [https://www.topsan.org/Proteins/NESGC/3f2z TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5L9G5_BACFN Q5L9G5_BACFN]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3F2Z is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2Z OCA].
+
Check<jmol>
-
[[Category: Bacteroides fragilis nctc 9343]]
+
<jmolCheckbox>
-
[[Category: Acton, T B.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f2/3f2z_consurf.spt"</scriptWhenChecked>
-
[[Category: Ciccosanti, C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Everett, J K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Foote, E L.]]
+
</jmolCheckbox>
-
[[Category: Forouhar, F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f2z ConSurf].
-
[[Category: Hunt, J F.]]
+
<div style="clear:both"></div>
-
[[Category: Janjua, H.]]
+
__TOC__
-
[[Category: Lee, D.]]
+
</StructureSection>
-
[[Category: Lew, S.]]
+
[[Category: Bacteroides fragilis NCTC 9343]]
-
[[Category: Montelione, G T.]]
+
[[Category: Large Structures]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Acton TB]]
-
[[Category: Nair, R.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Rost, B.]]
+
[[Category: Everett JK]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Foote EL]]
-
[[Category: Tong, L.]]
+
[[Category: Forouhar F]]
-
[[Category: Xiao, R.]]
+
[[Category: Hunt JF]]
-
[[Category: Nesg]]
+
[[Category: Janjua H]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Lee D]]
-
[[Category: Protein structure initiative]]
+
[[Category: Lew S]]
-
[[Category: Psi-2]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Nair R]]
-
[[Category: The present c-terminal domain is predominantly composed of beta strands.]]
+
[[Category: Rost B]]
-
[[Category: Unknown function]]
+
[[Category: Seetharaman J]]
-
 
+
[[Category: Tong L]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 20 07:49:18 2008''
+
[[Category: Xiao R]]

Current revision

Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B

PDB ID 3f2z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools