3e16

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{{Seed}}
 
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[[Image:3e16.png|left|200px]]
 
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==X-ray structure of human prostasin in complex with Benzoxazole warhead peptidomimic, lysine in P3==
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The line below this paragraph, containing "STRUCTURE_3e16", creates the "Structure Box" on the page.
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<StructureSection load='3e16' size='340' side='right'caption='[[3e16]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3e16]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E16 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E16 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B4C:BENZYL+[(1S)-5-AMINO-1-{[(1S)-1-({(1S)-5-AMINO-1-[(S)-1,3-BENZOXAZOL-2-YL(HYDROXY)METHYL]PENTYL}CARBAMOYL)-3-PHENYLPROPYL]CARBAMOYL}PENTYL]CARBAMATE'>B4C</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3eon|3eon]], [[3eop|3eop]], [[3e1x|3e1x]]</div></td></tr>
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{{STRUCTURE_3e16| PDB=3e16 | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRSS8 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e16 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e16 OCA], [https://pdbe.org/3e16 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e16 RCSB], [https://www.ebi.ac.uk/pdbsum/3e16 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e16 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/PRSS8_HUMAN PRSS8_HUMAN]] Possesses a trypsin-like cleavage specificity with a preference for poly-basic substrates. Stimulates epithelial sodium channel (ENaC) activity through activating cleavage of the gamma subunits (SCNN1G).<ref>PMID:15246975</ref> <ref>PMID:15474520</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e1/3e16_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e16 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Structure-based design was utilized to guide the early stage optimization of a substrate-like inhibitor to afford potent peptidomimetic inhibitors of the channel-activating protease prostasin. The first X-ray crystal structures of prostasin with small molecule inhibitors bound to the active site are also reported.
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===X-ray structure of human prostasin in complex with Benzoxazole warhead peptidomimic, lysine in P3===
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Discovery of inhibitors of the channel-activating protease prostasin (CAP1/PRSS8) utilizing structure-based design.,Tully DC, Vidal A, Chatterjee AK, Williams JA, Roberts MJ, Petrassi HM, Spraggon G, Bursulaya B, Pacoma R, Shipway A, Schumacher AM, Danahay H, Harris JL Bioorg Med Chem Lett. 2008 Nov 15;18(22):5895-9. Epub 2008 Aug 14. PMID:18752942<ref>PMID:18752942</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_18752942}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3e16" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 18752942 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18752942}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Human]]
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3E16 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E16 OCA].
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[[Category: Large Structures]]
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[[Category: Harris, J L]]
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==Reference==
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[[Category: Hornsby, M]]
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Discovery of inhibitors of the channel-activating protease prostasin (CAP1/PRSS8) utilizing structure-based design., Tully DC, Vidal A, Chatterjee AK, Williams JA, Roberts MJ, Petrassi HM, Spraggon G, Bursulaya B, Pacoma R, Shipway A, Schumacher AM, Danahay H, Harris JL, Bioorg Med Chem Lett. 2008 Aug 14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18752942 18752942]
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[[Category: Lesley, S A]]
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[[Category: Homo sapiens]]
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[[Category: Shipway, A]]
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[[Category: Single protein]]
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[[Category: Spraggon, G]]
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[[Category: Harris, J L.]]
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[[Category: Hornsby, M.]]
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[[Category: Lesley, S A.]]
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[[Category: Shipway, A.]]
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[[Category: Spraggon, G.]]
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[[Category: Benzoxazole]]
[[Category: Benzoxazole]]
[[Category: Cell membrane]]
[[Category: Cell membrane]]
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[[Category: Transmembrane]]
[[Category: Transmembrane]]
[[Category: Zymogen]]
[[Category: Zymogen]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 26 20:29:03 2008''
 

Current revision

X-ray structure of human prostasin in complex with Benzoxazole warhead peptidomimic, lysine in P3

PDB ID 3e16

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