3f4l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:28, 28 December 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3f4l.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a probable oxidoreductase yhhX in Triclinic form. Northeast Structural Genomics target ER647==
-
The line below this paragraph, containing "STRUCTURE_3f4l", creates the "Structure Box" on the page.
+
<StructureSection load='3f4l' size='340' side='right'caption='[[3f4l]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3f4l]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F4L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F4L FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3f4l| PDB=3f4l | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f4l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f4l OCA], [https://pdbe.org/3f4l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f4l RCSB], [https://www.ebi.ac.uk/pdbsum/3f4l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f4l ProSAT], [https://www.topsan.org/Proteins/NESGC/3f4l TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of a probable oxidoreductase yhhX in Triclinic form. Northeast Structural Genomics target ER647===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YHHX_ECOLI YHHX_ECOLI]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3F4L is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F4L OCA].
+
Check<jmol>
-
[[Category: Escherichia coli k-12]]
+
<jmolCheckbox>
-
[[Category: Abashidze, M.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f4/3f4l_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Everett, J K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Foote, E L.]]
+
</jmolCheckbox>
-
[[Category: Hunt, J F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f4l ConSurf].
-
[[Category: Janjua, H.]]
+
<div style="clear:both"></div>
-
[[Category: Montelione, G T.]]
+
__TOC__
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
</StructureSection>
-
[[Category: Nair, R.]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Rost, B.]]
+
[[Category: Large Structures]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Abashidze M]]
-
[[Category: Tong, L.]]
+
[[Category: Acton TB]]
-
[[Category: Wang, H.]]
+
[[Category: Everett JK]]
-
[[Category: Xiao, R.]]
+
[[Category: Foote EL]]
-
[[Category: Nesg]]
+
[[Category: Hunt JF]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Janjua H]]
-
[[Category: Oxidoreductase]]
+
[[Category: Montelione GT]]
-
[[Category: Oxidoreductase yhhx]]
+
[[Category: Nair R]]
-
[[Category: Protein structure initiative]]
+
[[Category: Rost B]]
-
[[Category: Psi-2]]
+
[[Category: Seetharaman J]]
-
[[Category: Structural genomic]]
+
[[Category: Tong L]]
-
 
+
[[Category: Wang H]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 27 13:43:26 2008''
+
[[Category: Xiao R]]

Current revision

Crystal structure of a probable oxidoreductase yhhX in Triclinic form. Northeast Structural Genomics target ER647

PDB ID 3f4l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3f4l"
Personal tools