3e9j

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{{Seed}}
 
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[[Image:3e9j.png|left|200px]]
 
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==Structure of the charge-transfer intermediate of the transmembrane redox catalyst DsbB==
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The line below this paragraph, containing "STRUCTURE_3e9j", creates the "Structure Box" on the page.
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<StructureSection load='3e9j' size='340' side='right'caption='[[3e9j]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3e9j]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E9J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E9J FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UQ1:UBIQUINONE-1'>UQ1</scene></td></tr>
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{{STRUCTURE_3e9j| PDB=3e9j | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e9j OCA], [https://pdbe.org/3e9j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e9j RCSB], [https://www.ebi.ac.uk/pdbsum/3e9j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e9j ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DSBA_ECOLI DSBA_ECOLI] Required for disulfide bond formation in some periplasmic proteins such as PhoA or OmpA. Acts by transferring its disulfide bond to other proteins and is reduced in the process. DsbA is reoxidized by DsbB. Required for pilus biogenesis. PhoP-regulated transcription is redox-sensitive, being activated when the periplasm becomes more reducing (deletion of dsbA/dsbB, treatment with dithiothreitol). MgrB acts between DsbA/DsbB and PhoP/PhoQ in this pathway.<ref>PMID:1429594</ref> <ref>PMID:22267510</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e9/3e9j_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e9j ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Disulfide bond formation is a critical step in the folding of many secretory proteins. In bacteria, disulfide bonds are introduced by the periplasmic dithiol oxidase DsbA, which transfers its catalytic disulfide bond to folding polypeptides. Reduced DsbA is reoxidized by ubiquinone Q8, catalyzed by inner membrane quinone reductase DsbB. Here, we report the preparation of a kinetically stable ternary complex between wild-type DsbB, containing all essential cysteines, Q8 and DsbA covalently bound to DsbB. The crystal structure of this trapped DsbB reaction intermediate exhibits a charge-transfer interaction between Q8 and the Cys44 in the DsbB reaction center providing experimental evidence for the mechanism of de novo disulfide bond generation in DsbB.
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===Structure of the charge-transfer intermediate of the transmembrane redox catalyst DsbB===
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Preparation and structure of the charge-transfer intermediate of the transmembrane redox catalyst DsbB.,Malojcic G, Owen RL, Grimshaw JP, Glockshuber R FEBS Lett. 2008 Oct 15;582(23-24):3301-7. Epub 2008 Sep 5. PMID:18775700<ref>PMID:18775700</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3e9j" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_18775700}}, adds the Publication Abstract to the page
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*[[Protein disulfide oxidoreductase 3D structures|Protein disulfide oxidoreductase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18775700 is the PubMed ID number.
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*[[Thiol:disulfide interchange protein 3D structures|Thiol:disulfide interchange protein 3D structures]]
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== References ==
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{{ABSTRACT_PUBMED_18775700}}
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<references/>
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__TOC__
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==About this Structure==
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</StructureSection>
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3E9J is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E9J OCA].
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[[Category: Escherichia coli K-12]]
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[[Category: Large Structures]]
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==Reference==
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[[Category: Glockshuber R]]
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Preparation and structure of the charge-transfer intermediate of the transmembrane redox catalyst DsbB., Malojcic G, Owen RL, Grimshaw JP, Glockshuber R, FEBS Lett. 2008 Oct 15;582(23-24):3301-7. Epub 2008 Sep 5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18775700 18775700]
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[[Category: Malojcic G]]
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[[Category: Escherichia coli k12]]
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[[Category: Owen RL]]
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[[Category: Glockshuber, R.]]
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[[Category: Malojcic, G.]]
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[[Category: Owen, R L.]]
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[[Category: Cell inner membrane]]
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[[Category: Cell membrane]]
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[[Category: Chaperone]]
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[[Category: Charge transfer reaction intermediate]]
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[[Category: Electron transport]]
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[[Category: Four helix bundle]]
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[[Category: Mechanism of disulfide bond formation]]
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[[Category: Membrane]]
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[[Category: Membrane protein complex]]
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[[Category: Oxidative protein folding in escherichia coli periplasm]]
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[[Category: Oxidoreductase]]
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[[Category: Periplasm]]
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[[Category: Redox-active center]]
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[[Category: Transmembrane]]
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[[Category: Transport]]
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[[Category: X-ray crystal structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Dec 5 09:50:28 2008''
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Current revision

Structure of the charge-transfer intermediate of the transmembrane redox catalyst DsbB

PDB ID 3e9j

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