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1vef
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1vef" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vef, resolution 1.35Å" /> '''Acetylornithine amin...) |
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| - | [[Image:1vef.gif|left|200px]]<br /><applet load="1vef" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1vef, resolution 1.35Å" /> | ||
| - | '''Acetylornithine aminotransferase from Thermus thermophilus HB8'''<br /> | ||
| - | == | + | ==Acetylornithine aminotransferase from Thermus thermophilus HB8== |
| - | + | <StructureSection load='1vef' size='340' side='right'caption='[[1vef]], [[Resolution|resolution]] 1.35Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[Category: | + | <table><tr><td colspan='2'>[[1vef]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VEF FirstGlance]. <br> |
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vef OCA], [https://pdbe.org/1vef PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vef RCSB], [https://www.ebi.ac.uk/pdbsum/1vef PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vef ProSAT], [https://www.topsan.org/Proteins/RSGI/1vef TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/LYSJ_THET8 LYSJ_THET8] Catalyzes the transfer of the amino group of L-glutamate to [LysW]-aminoadipate 6-semialdehyde, generating [LysW]-gamma-L-lysine.[HAMAP-Rule:MF_02084] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1vef_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vef ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Thermus thermophilus]] | [[Category: Thermus thermophilus]] | ||
| - | [[Category: Goto | + | [[Category: Goto M]] |
| - | [[Category: Hirotsu | + | [[Category: Hirotsu K]] |
| - | [[Category: Matsumura | + | [[Category: Matsumura M]] |
| - | [[Category: Miyahara | + | [[Category: Miyahara I]] |
| - | [[Category: Omi | + | [[Category: Omi R]] |
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Current revision
Acetylornithine aminotransferase from Thermus thermophilus HB8
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