3fif

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:48, 21 November 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3fif is ON HOLD
+
==Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.==
-
 
+
<StructureSection load='3fif' size='340' side='right'caption='[[3fif]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
Authors: Kuzin, A.P., Su, M., Seetharaman, J., P.ROSSI,C.X.CHEN,M.JIANG,K.CUNNINGHAM,L.MA,R.XIAO,J.C.LIU, AUTHOR 2 M.BARAN,G.V.T.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE,, Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3fif]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FIF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FIF FirstGlance]. <br>
-
Description: Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 31 09:48:16 2008''
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fif OCA], [https://pdbe.org/3fif PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fif RCSB], [https://www.ebi.ac.uk/pdbsum/3fif PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fif ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YGDR_ECOLI YGDR_ECOLI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/3fif_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fif ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Escherichia coli]]
 +
[[Category: Escherichia coli K-12]]
 +
[[Category: Large Structures]]
 +
[[Category: Acton TB]]
 +
[[Category: Baran M]]
 +
[[Category: Chen CX]]
 +
[[Category: Cunningham K]]
 +
[[Category: Hunt JF]]
 +
[[Category: Jiang M]]
 +
[[Category: Kuzin AP]]
 +
[[Category: Liu JC]]
 +
[[Category: Ma L]]
 +
[[Category: Montelione GT]]
 +
[[Category: Rossi P]]
 +
[[Category: Rost B]]
 +
[[Category: Seetharaman J]]
 +
[[Category: Su M]]
 +
[[Category: Swapna GVT]]
 +
[[Category: Tong L]]
 +
[[Category: Xiao R]]

Current revision

Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.

PDB ID 3fif

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3fif"
Personal tools