2qqp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:17, 21 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qqp.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of Authentic Providence Virus==
-
The line below this paragraph, containing "STRUCTURE_2qqp", creates the "Structure Box" on the page.
+
<SX load='2qqp' size='340' side='right' viewer='molstar' caption='[[2qqp]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qqp]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Providence_virus Providence virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QQP FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
{{STRUCTURE_2qqp| PDB=2qqp | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qqp OCA], [https://pdbe.org/2qqp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qqp RCSB], [https://www.ebi.ac.uk/pdbsum/2qqp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qqp ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q80IX5_PRVFL Q80IX5_PRVFL]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qq/2qqp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qqp ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Authentic Providence Virus===
+
==See Also==
-
 
+
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
-
 
+
__TOC__
-
<!--
+
</SX>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12642108}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12642108 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12642108}}
+
-
 
+
-
==About this Structure==
+
-
2QQP is a 9 chains structure of sequences from [http://en.wikipedia.org/wiki/Providence_virus Providence virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QQP OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:12642108</ref><references group="xtra"/>
+
[[Category: Providence virus]]
[[Category: Providence virus]]
-
[[Category: Johnson, J E.]]
+
[[Category: Johnson JE]]
-
[[Category: Speir, J A.]]
+
[[Category: Speir JA]]
-
[[Category: Taylor, D J.]]
+
[[Category: Taylor DJ]]
-
[[Category: Auto proteolysis]]
+
-
[[Category: Auto-catalytic cleavage]]
+
-
[[Category: Beta barrel]]
+
-
[[Category: Capsid]]
+
-
[[Category: Coat protein]]
+
-
[[Category: Icosahedral virus]]
+
-
[[Category: Ig-like domain]]
+
-
[[Category: Protein-rna complex]]
+
-
[[Category: Quasiequivalence]]
+
-
[[Category: Tetraviridae]]
+
-
[[Category: Tetravirus]]
+
-
[[Category: Virus]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 10:36:40 2009''
+

Current revision

Crystal Structure of Authentic Providence Virus

2qqp, resolution 3.80Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qqp"
Personal tools