3fg8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 30 October 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3fg8.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of PAS domain of RHA05790==
-
The line below this paragraph, containing "STRUCTURE_3fg8", creates the "Structure Box" on the page.
+
<StructureSection load='3fg8' size='340' side='right'caption='[[3fg8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3fg8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_jostii_RHA1 Rhodococcus jostii RHA1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FG8 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PB:(3R)-3-(PHOSPHONOOXY)BUTANOIC+ACID'>3PB</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3fg8| PDB=3fg8 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fg8 OCA], [https://pdbe.org/3fg8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fg8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fg8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fg8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3fg8 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of PAS domain of RHA05790===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q0S7I6_RHOJR Q0S7I6_RHOJR]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3FG8 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Rhodococcus_jostii_rha1 Rhodococcus jostii rha1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG8 OCA].
+
Check<jmol>
-
[[Category: Rhodococcus jostii rha1]]
+
<jmolCheckbox>
-
[[Category: Chang, C.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/3fg8_consurf.spt"</scriptWhenChecked>
-
[[Category: Cui, H.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fg8 ConSurf].
-
[[Category: Savchenko, A.]]
+
<div style="clear:both"></div>
-
[[Category: Xu, X.]]
+
__TOC__
-
[[Category: Mcsg]]
+
</StructureSection>
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Pas domain]]
+
[[Category: Rhodococcus jostii RHA1]]
-
[[Category: Protein structure initiative]]
+
[[Category: Chang C]]
-
[[Category: Psi-2]]
+
[[Category: Cui H]]
-
[[Category: Structural genomic]]
+
[[Category: Edwards A]]
-
[[Category: Uncharacterized protein]]
+
[[Category: Joachimiak A]]
-
[[Category: Unknown function]]
+
[[Category: Savchenko A]]
-
 
+
[[Category: Xu X]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 10:50:01 2009''
+

Current revision

Crystal structure of PAS domain of RHA05790

PDB ID 3fg8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools