3e86

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:45, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3e86.png|left|200px]]
 
-
<!--
+
==High resolution Crystal Structure of the open NaK channel pore==
-
The line below this paragraph, containing "STRUCTURE_3e86", creates the "Structure Box" on the page.
+
<StructureSection load='3e86' size='340' side='right'caption='[[3e86]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3e86]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E86 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E86 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
{{STRUCTURE_3e86| PDB=3e86 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e86 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e86 OCA], [https://pdbe.org/3e86 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e86 RCSB], [https://www.ebi.ac.uk/pdbsum/3e86 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e86 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q81HW2_BACCR Q81HW2_BACCR]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/3e86_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e86 ConSurf].
 +
<div style="clear:both"></div>
-
===High resolution Crystal Structure of the open NaK channel pore===
+
==See Also==
-
 
+
*[[Potassium channel 3D structures|Potassium channel 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19098917}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 19098917 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_19098917}}
+
-
 
+
-
==About this Structure==
+
-
3E86 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E86 OCA].
+
-
 
+
-
==Reference==
+
-
High-resolution structure of the open NaK channel., Alam A, Jiang Y, Nat Struct Mol Biol. 2009 Jan;16(1):30-4. Epub 2008 Dec 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19098917 19098917]
+
[[Category: Bacillus cereus]]
[[Category: Bacillus cereus]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
+
[[Category: Alam A]]
-
[[Category: 2-transmembrane helix channel]]
+
[[Category: Jiang Y]]
-
[[Category: Ionic channel]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Non-selective cation channel]]
+
-
[[Category: Tetrameric cation channel family]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 20:12:07 2009''
+

Current revision

High resolution Crystal Structure of the open NaK channel pore

PDB ID 3e86

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools