2hfd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:40, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2hfd.png|left|200px]]
 
-
<!--
+
==NMR structure of protein Hydrogenase-1 operon protein hyaE from Escherichia coli: Northeast Structural Genomics Consortium Target ER415==
-
The line below this paragraph, containing "STRUCTURE_2hfd", creates the "Structure Box" on the page.
+
<StructureSection load='2hfd' size='340' side='right'caption='[[2hfd]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2hfd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HFD FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hfd OCA], [https://pdbe.org/2hfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hfd RCSB], [https://www.ebi.ac.uk/pdbsum/2hfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hfd ProSAT], [https://www.topsan.org/Proteins/NESGC/2hfd TOPSAN]</span></td></tr>
-
{{STRUCTURE_2hfd| PDB=2hfd | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===NMR structure of protein Hydrogenase-1 operon protein hyaE from Escherichia coli: Northeast Structural Genomics Consortium Target ER415===
+
[https://www.uniprot.org/uniprot/HYAE_ECOLI HYAE_ECOLI] Not known. Could form, along with HyaD, a complex involved in the processing of the hydrogenase 1 structural operon.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19039680}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19039680 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hf/2hfd_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_19039680}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hfd ConSurf].
-
2HFD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HFD OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
Protein chaperones Q8ZP25_SALTY from Salmonella typhimurium and HYAE_ECOLI from Escherichia coli exhibit thioredoxin-like structures despite lack of canonical thioredoxin active site sequence motif., Parish D, Benach J, Liu G, Singarapu KK, Xiao R, Acton T, Su M, Bansal S, Prestegard JH, Hunt J, Montelione GT, Szyperski T, J Struct Funct Genomics. 2008 Dec;9(1-4):41-9. Epub 2008 Nov 26. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19039680 19039680]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
+
[[Category: Acton T]]
-
[[Category: Alfa-beta]]
+
[[Category: Atreya HS]]
-
[[Category: Nesgc]]
+
[[Category: Baran M]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Cunningham K]]
-
[[Category: Protein structure]]
+
[[Category: Eletsky A]]
-
[[Category: Protein structure initiative]]
+
[[Category: Janjua H]]
-
[[Category: Psi-2]]
+
[[Category: Liu G]]
-
[[Category: Structural genomic]]
+
[[Category: Liu J]]
-
[[Category: Unknown function]]
+
[[Category: Ma LC]]
-
 
+
[[Category: Montelione GT]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 20:30:03 2009''
+
[[Category: Parish D]]
 +
[[Category: Rost B]]
 +
[[Category: Singarapu KK]]
 +
[[Category: Swapna GVT]]
 +
[[Category: Szyperski T]]
 +
[[Category: Xiao R]]
 +
[[Category: Xu D]]

Current revision

NMR structure of protein Hydrogenase-1 operon protein hyaE from Escherichia coli: Northeast Structural Genomics Consortium Target ER415

PDB ID 2hfd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hfd"
Personal tools