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2jxi

From Proteopedia

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{{Seed}}
 
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[[Image:2jxi.png|left|200px]]
 
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<!--
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==Solution structure of the DNA-binding domain of Pseudomonas putida Proline utilization A (putA) bound to GTTGCA DNA sequence==
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The line below this paragraph, containing "STRUCTURE_2jxi", creates the "Structure Box" on the page.
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<StructureSection load='2jxi' size='340' side='right'caption='[[2jxi]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2jxi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JXI FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jxi OCA], [https://pdbe.org/2jxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jxi RCSB], [https://www.ebi.ac.uk/pdbsum/2jxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jxi ProSAT]</span></td></tr>
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{{STRUCTURE_2jxi| PDB=2jxi | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q88D80_PSEPK Q88D80_PSEPK] Oxidizes proline to glutamate for use as a carbon and nitrogen source.[PIRNR:PIRNR000197]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jx/2jxi_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jxi ConSurf].
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<div style="clear:both"></div>
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===Solution structure of the DNA-binding domain of Pseudomonas putida Proline utilization A (putA) bound to GTTGCA DNA sequence===
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==See Also==
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*[[Proline utilization A|Proline utilization A]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_18767154}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18767154 is the PubMed ID number.
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-->
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{{ABSTRACT_PUBMED_18767154}}
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==About this Structure==
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2JXI is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JXI OCA].
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==Reference==
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<ref group="xtra">PMID:18767154</ref><references group="xtra"/>
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[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
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[[Category: Becker, D.]]
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[[Category: Synthetic construct]]
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[[Category: Halouska, S.]]
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[[Category: Becker D]]
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[[Category: Powers, R.]]
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[[Category: Halouska S]]
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[[Category: Zhou, Y.]]
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[[Category: Powers R]]
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[[Category: Binding]]
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[[Category: Zhou Y]]
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[[Category: Dna]]
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[[Category: Dna binding protein]]
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[[Category: Proline]]
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[[Category: Puta]]
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[[Category: Utilization]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 11:20:14 2009''
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Current revision

Solution structure of the DNA-binding domain of Pseudomonas putida Proline utilization A (putA) bound to GTTGCA DNA sequence

PDB ID 2jxi

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