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1x0r

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(New page: 200px<br /><applet load="1x0r" size="450" color="white" frame="true" align="right" spinBox="true" caption="1x0r, resolution 2.00&Aring;" /> '''Thioredoxin Peroxida...)
Current revision (05:00, 17 October 2024) (edit) (undo)
 
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[[Image:1x0r.gif|left|200px]]<br /><applet load="1x0r" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1x0r, resolution 2.00&Aring;" />
 
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'''Thioredoxin Peroxidase from Aeropyrum pernix K1'''<br />
 
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==About this Structure==
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==Thioredoxin Peroxidase from Aeropyrum pernix K1==
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1X0R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix] with EDO as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Peroxiredoxin Peroxiredoxin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.15 1.11.1.15] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1X0R OCA].
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<StructureSection load='1x0r' size='340' side='right'caption='[[1x0r]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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==Reference==
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<table><tr><td colspan='2'>[[1x0r]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X0R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X0R FirstGlance]. <br>
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Crystal structure of thioredoxin peroxidase from aerobic hyperthermophilic archaeon Aeropyrum pernix K1., Nakamura T, Yamamoto T, Inoue T, Matsumura H, Kobayashi A, Hagihara Y, Uegaki K, Ataka M, Kai Y, Ishikawa K, Proteins. 2006 Mar 15;62(3):822-6. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16342268 16342268]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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[[Category: Aeropyrum pernix]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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[[Category: Peroxiredoxin]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x0r OCA], [https://pdbe.org/1x0r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x0r RCSB], [https://www.ebi.ac.uk/pdbsum/1x0r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x0r ProSAT]</span></td></tr>
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[[Category: Single protein]]
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</table>
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[[Category: Ataka, M.]]
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== Function ==
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[[Category: Hagihara, Y.]]
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[https://www.uniprot.org/uniprot/TDXH_AERPE TDXH_AERPE]
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[[Category: Inoue, T.]]
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== Evolutionary Conservation ==
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[[Category: Ishikawa, K.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Kai, Y.]]
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Check<jmol>
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[[Category: Kobayashi, A.]]
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<jmolCheckbox>
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[[Category: Matsumura, H.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x0/1x0r_consurf.spt"</scriptWhenChecked>
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[[Category: Nakamura, T.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: Uegaki, K.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Yamamoto, T.]]
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</jmolCheckbox>
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[[Category: EDO]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x0r ConSurf].
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[[Category: peroxiredoxin]]
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<div style="clear:both"></div>
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[[Category: thioredoxin fold]]
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__TOC__
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</StructureSection>
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 05:46:45 2007''
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[[Category: Aeropyrum pernix K1]]
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[[Category: Large Structures]]
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[[Category: Ataka M]]
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[[Category: Hagihara Y]]
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[[Category: Inoue T]]
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[[Category: Ishikawa K]]
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[[Category: Kai Y]]
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[[Category: Kobayashi A]]
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[[Category: Matsumura H]]
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[[Category: Nakamura T]]
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[[Category: Uegaki K]]
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[[Category: Yamamoto T]]

Current revision

Thioredoxin Peroxidase from Aeropyrum pernix K1

PDB ID 1x0r

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