3c7h

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{{Seed}}
 
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[[Image:3c7h.png|left|200px]]
 
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==Crystal structure of glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from Bacillus subtilis in complex with AXOS-4-0.5.==
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The line below this paragraph, containing "STRUCTURE_3c7h", creates the "Structure Box" on the page.
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<StructureSection load='3c7h' size='340' side='right'caption='[[3c7h]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3c7h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C7H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C7H FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRD_900117:4beta-beta-xylotriose'>PRD_900117</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
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{{STRUCTURE_3c7h| PDB=3c7h | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c7h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c7h OCA], [https://pdbe.org/3c7h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c7h RCSB], [https://www.ebi.ac.uk/pdbsum/3c7h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c7h ProSAT]</span></td></tr>
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</table>
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===Crystal structure of glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from Bacillus subtilis in complex with AXOS-4-0.5.===
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== Function ==
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[https://www.uniprot.org/uniprot/XYND_BACSU XYND_BACSU] Cleaves arabinose units from O-2- or O-3-monosubstituted xylose residues, thereby assisting in arabinoxylan (AX) and short-chain arabinoxylo-oligosaccharide (AXOS) degradation. Is more active on wheat bran AXOS than on wheat water-extractable AX and rye water-extractable AX. Does not display endoxylanase, xylosidase or arabinanase activity.<ref>PMID:17426966</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_18980579}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 18980579 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c7/3c7h_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_18980579}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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3C7H is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C7H OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c7h ConSurf].
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<div style="clear:both"></div>
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==Reference==
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== References ==
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Structural analysis of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase in complex with xylotetraose reveals a different binding mechanism compared to other members of the same family., Vandermarliere E, Bourgois TM, Winn MD, Van Campenhout S, Volckaert G, Delcour JA, Strelkov SV, Rabijns A, Courtin CM, Biochem J. 2008 Nov 4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18980579 18980579]
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<references/>
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[[Category: Alpha-N-arabinofuranosidase]]
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__TOC__
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</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
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[[Category: Bourgois TM]]
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[[Category: 5-bladed beta-propeller fold]]
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[[Category: Courtin CM]]
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[[Category: Beta-sandwich]]
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[[Category: Delcour JA]]
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[[Category: Hydrolase]]
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[[Category: Rabijns A]]
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[[Category: Xylan degradation]]
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[[Category: Strelkov SV]]
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[[Category: Van Campenhout S]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 20:10:04 2009''
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[[Category: Vandermarliere E]]
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[[Category: Volckaert G]]
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[[Category: Winn MD]]

Current revision

Crystal structure of glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from Bacillus subtilis in complex with AXOS-4-0.5.

PDB ID 3c7h

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