1ygk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:37, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ygk.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives==
-
The line below this paragraph, containing "STRUCTURE_1ygk", creates the "Structure Box" on the page.
+
<StructureSection load='1ygk' size='340' side='right'caption='[[1ygk]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ygk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ovis_aries Ovis aries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YGK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RRC:R-ROSCOVITINE'>RRC</scene></td></tr>
-
{{STRUCTURE_1ygk| PDB=1ygk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ygk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ygk OCA], [https://pdbe.org/1ygk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ygk RCSB], [https://www.ebi.ac.uk/pdbsum/1ygk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ygk ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PDXK_SHEEP PDXK_SHEEP] Required for synthesis of pyridoxal-5-phosphate from vitamin B6.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yg/1ygk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ygk ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives===
+
==See Also==
-
 
+
*[[Pyridoxal kinase|Pyridoxal kinase]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15985434}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 15985434 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_15985434}}
+
-
 
+
-
==About this Structure==
+
-
1YGK is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Ovis_aries Ovis aries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YGK OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:15985434</ref><references group="xtra"/>
+
[[Category: Ovis aries]]
[[Category: Ovis aries]]
-
[[Category: Pyridoxal kinase]]
+
[[Category: Bach S]]
-
[[Category: Bach, S.]]
+
[[Category: Cao P]]
-
[[Category: Cao, P.]]
+
[[Category: Chang W-R]]
-
[[Category: Chang, W R.]]
+
[[Category: Ferandin Y]]
-
[[Category: Ferandin, Y.]]
+
[[Category: Galons H]]
-
[[Category: Galons, H.]]
+
[[Category: Gray N]]
-
[[Category: Gray, N.]]
+
[[Category: Jiang T]]
-
[[Category: Jiang, T.]]
+
[[Category: Koken M]]
-
[[Category: Koken, M.]]
+
[[Category: Li M-H]]
-
[[Category: Li, M H.]]
+
[[Category: Liang D-C]]
-
[[Category: Liang, D C.]]
+
[[Category: Meijer L]]
-
[[Category: Meijer, L.]]
+
[[Category: Reinhardt J]]
-
[[Category: Reinhardt, J.]]
+
[[Category: Tang L]]
-
[[Category: Tang, L.]]
+
[[Category: Wan Y]]
-
[[Category: Wan, Y.]]
+
[[Category: Wang F]]
-
[[Category: Wang, F.]]
+
-
[[Category: Alpha-beta structure]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 09:53:05 2009''
+

Current revision

Crystal Structure of Pyridoxal Kinase in Complex with Roscovitine and Derivatives

PDB ID 1ygk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools