1e09

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{{Seed}}
 
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[[Image:1e09.png|left|200px]]
 
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==Solution Structure of the Major Cherry Allergen Pru av 1==
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The line below this paragraph, containing "STRUCTURE_1e09", creates the "Structure Box" on the page.
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<StructureSection load='1e09' size='340' side='right'caption='[[1e09]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1e09]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Prunus_avium Prunus avium]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E09 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E09 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e09 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e09 OCA], [https://pdbe.org/1e09 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e09 RCSB], [https://www.ebi.ac.uk/pdbsum/1e09 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e09 ProSAT]</span></td></tr>
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{{STRUCTURE_1e09| PDB=1e09 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PRU1_PRUAV PRU1_PRUAV]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e0/1e09_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e09 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Birch pollinosis is often accompanied by hypersensitivity to fruit as a consequence of the cross-reaction of pollen allergen-specific IgE antibodies with homologous food proteins. To provide a basis for examining the cross-reactivity on a structural level, we used heteronuclear multidimensional NMR spectroscopy to determine the high-resolution three-dimensional structure of the major cherry allergen, Pru av 1, in solution. Based on a detailed comparison of the virtually identical structures of Pru av 1 and Bet v 1, the major birch pollen allergen, we propose an explanation for a significant aspect of the observed cross-reactivity pattern among the family of allergens under consideration. The large hydrophobic cavity expected to be important for the still unknown physiological function of Bet v 1 is conserved in Pru av 1. Structural homology to a domain of human MLN64 associated with cholesterol transport suggests phytosteroids as putative ligands for Pru av 1. NMR spectroscopy provides experimental evidence that Pru av 1 interacts with phytosteroids, and molecular modeling shows that the hydrophobic cavity is large enough to accommodate two such molecules.
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===SOLUTION STRUCTURE OF THE MAJOR CHERRY ALLERGEN PRU AV 1===
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Allergic cross-reactivity made visible: solution structure of the major cherry allergen Pru av 1.,Neudecker P, Schweimer K, Nerkamp J, Scheurer S, Vieths S, Sticht H, Rosch P J Biol Chem. 2001 Jun 22;276(25):22756-63. Epub 2001 Apr 3. PMID:11287426<ref>PMID:11287426</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_11287426}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1e09" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 11287426 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_11287426}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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1E09 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Prunus_avium Prunus avium]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E09 OCA].
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==Reference==
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<ref group="xtra">PMID:11287426</ref><references group="xtra"/>
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[[Category: Prunus avium]]
[[Category: Prunus avium]]
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[[Category: Boehm, M.]]
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[[Category: Boehm M]]
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[[Category: Nerkamp, J.]]
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[[Category: Nerkamp J]]
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[[Category: Neudecker, P.]]
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[[Category: Neudecker P]]
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[[Category: Roesch, P.]]
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[[Category: Roesch P]]
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[[Category: Scheurer, S.]]
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[[Category: Scheurer S]]
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[[Category: Schweimer, K.]]
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[[Category: Schweimer K]]
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[[Category: Sticht, H.]]
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[[Category: Sticht H]]
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[[Category: Vieths, S.]]
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[[Category: Vieths S]]
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[[Category: Heteronuclear nmr]]
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[[Category: Major cherry allergen]]
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[[Category: Pathogenesis-related protein]]
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[[Category: Structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 12:17:28 2009''
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Current revision

Solution Structure of the Major Cherry Allergen Pru av 1

PDB ID 1e09

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