This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1tyg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:42, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1tyg.png|left|200px]]
 
-
<!--
+
==Structure of the thiazole synthase/ThiS complex==
-
The line below this paragraph, containing "STRUCTURE_1tyg", creates the "Structure Box" on the page.
+
<StructureSection load='1tyg' size='340' side='right'caption='[[1tyg]], [[Resolution|resolution]] 3.15&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1tyg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TYG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TYG FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.15&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_1tyg| PDB=1tyg | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tyg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tyg OCA], [https://pdbe.org/1tyg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tyg RCSB], [https://www.ebi.ac.uk/pdbsum/1tyg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tyg ProSAT]</span></td></tr>
-
 
+
</table>
-
===Structure of the thiazole synthase/ThiS complex===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/THIS_BACSU THIS_BACSU] Is the sulfur donor in the synthesis of the thiazole phosphate moiety of thiamine phosphate.<ref>PMID:15489164</ref>
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_15362849}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 15362849 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ty/1tyg_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_15362849}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1TYG is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TYG OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tyg ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
== References ==
-
<ref group="xtra">PMID:15362849</ref><references group="xtra"/>
+
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Begley, T P.]]
+
[[Category: Large Structures]]
-
[[Category: Chatterjee, A.]]
+
[[Category: Begley TP]]
-
[[Category: Dorrestein, P C.]]
+
[[Category: Chatterjee A]]
-
[[Category: Ealick, S E.]]
+
[[Category: Dorrestein PC]]
-
[[Category: McLafferty, F W.]]
+
[[Category: Ealick SE]]
-
[[Category: Settembre, E C.]]
+
[[Category: McLafferty FW]]
-
[[Category: Zhai, H.]]
+
[[Category: Settembre EC]]
-
[[Category: Alpha beta barrel]]
+
[[Category: Zhai H]]
-
[[Category: Protein-protein complex]]
+
-
[[Category: Thig]]
+
-
[[Category: These]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 12:18:13 2009''
+

Current revision

Structure of the thiazole synthase/ThiS complex

PDB ID 1tyg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1tyg"
Personal tools