1xm8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1xm8" size="450" color="white" frame="true" align="right" spinBox="true" caption="1xm8, resolution 1.74&Aring;" /> '''X-RAY STRUCTURE OF G...)
Current revision (08:51, 14 February 2024) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xm8.jpg|left|200px]]<br /><applet load="1xm8" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1xm8, resolution 1.74&Aring;" />
 
-
'''X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350'''<br />
 
-
==About this Structure==
+
==X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350==
-
1XM8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana] with ZN, FE, ACY and PEG as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Hydroxyacylglutathione_hydrolase Hydroxyacylglutathione hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.2.6 3.1.2.6] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1XM8 OCA].
+
<StructureSection load='1xm8' size='340' side='right'caption='[[1xm8]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
-
[[Category: Arabidopsis thaliana]]
+
== Structural highlights ==
-
[[Category: Hydroxyacylglutathione hydrolase]]
+
<table><tr><td colspan='2'>[[1xm8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XM8 FirstGlance]. <br>
-
[[Category: Single protein]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
-
[[Category: Allard, S.T.M.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[Category: Bingman, C.A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xm8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xm8 OCA], [https://pdbe.org/1xm8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xm8 RCSB], [https://www.ebi.ac.uk/pdbsum/1xm8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xm8 ProSAT], [https://www.topsan.org/Proteins/CESG/1xm8 TOPSAN]</span></td></tr>
-
[[Category: Bitto, E.]]
+
</table>
-
[[Category: CESG, Center.for.Eukaryotic.Structural.Genomics.]]
+
== Function ==
-
[[Category: Jr., G.N.Phillips.]]
+
[https://www.uniprot.org/uniprot/GLO2N_ARATH GLO2N_ARATH] Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.<ref>PMID:16227621</ref>
-
[[Category: Smith, D.W.]]
+
== Evolutionary Conservation ==
-
[[Category: Wesenberg, G.E.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: ACY]]
+
Check<jmol>
-
[[Category: FE]]
+
<jmolCheckbox>
-
[[Category: PEG]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xm/1xm8_consurf.spt"</scriptWhenChecked>
-
[[Category: ZN]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: at2g31350]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: b-lactamase fold]]
+
</jmolCheckbox>
-
[[Category: center for eukaryotic structural genomics]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xm8 ConSurf].
-
[[Category: cesg]]
+
<div style="clear:both"></div>
-
[[Category: metallo-hydrolase]]
+
-
[[Category: mitochondrial isozyme]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomics]]
+
-
[[Category: thioester hydrolase]]
+
-
[[Category: zinc/iron binuclear center]]
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 06:10:20 2007''
+
==See Also==
 +
*[[Glyoxalase 3D structures|Glyoxalase 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Arabidopsis thaliana]]
 +
[[Category: Large Structures]]
 +
[[Category: Allard STM]]
 +
[[Category: Bingman CA]]
 +
[[Category: Bitto E]]
 +
[[Category: Phillips Jr GN]]
 +
[[Category: Smith DW]]
 +
[[Category: Wesenberg GE]]

Current revision

X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350

PDB ID 1xm8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1xm8"
Personal tools