2fqm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:24, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2fqm.png|left|200px]]
 
-
<!--
+
==Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus==
-
The line below this paragraph, containing "STRUCTURE_2fqm", creates the "Structure Box" on the page.
+
<StructureSection load='2fqm' size='340' side='right'caption='[[2fqm]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2fqm]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vesicular_stomatitis_Indiana_virus Vesicular stomatitis Indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FQM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fqm OCA], [https://pdbe.org/2fqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fqm RCSB], [https://www.ebi.ac.uk/pdbsum/2fqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fqm ProSAT]</span></td></tr>
-
{{STRUCTURE_2fqm| PDB=2fqm | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus===
+
[https://www.uniprot.org/uniprot/PHOSP_VSIVM PHOSP_VSIVM] Essential component of the RNA polymerase transcription and replication complex. Binds the viral ribonucleocapsid and positions the L polymerase on the template. May act as a chaperone for newly synthesized free N protein, so-called N(0). Plays a role in virion assembly (By similarity).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16501089}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 16501089 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fq/2fqm_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_16501089}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fqm ConSurf].
-
2FQM is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Vesicular_stomatitis_indiana_virus Vesicular stomatitis indiana virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQM OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:16501089</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Vesicular stomatitis indiana virus]]
+
[[Category: Vesicular stomatitis Indiana virus]]
-
[[Category: Ding, H.]]
+
[[Category: Ding H]]
-
[[Category: Green, T J.]]
+
[[Category: Green TJ]]
-
[[Category: Lu, S.]]
+
[[Category: Lu S]]
-
[[Category: Luo, M.]]
+
[[Category: Luo M]]
-
[[Category: Cofactor]]
+
-
[[Category: Negative strand rna virus]]
+
-
[[Category: Polymerase]]
+
-
[[Category: Replication]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 13:11:13 2009''
+

Current revision

Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus

PDB ID 2fqm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2fqm"
Personal tools