This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 3djj
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3djj]], resolution 1.10Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3djj]], [[Resolution|resolution]] 1.10Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | ||
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | |LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutathione-disulfide_reductase Glutathione-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.7 1.8.1.7] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutathione-disulfide_reductase Glutathione-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.7 1.8.1.7] </span> | ||
| - | |GENE= GSR, GLUR, GRD1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 | + | |GENE= GSR, GLUR, GRD1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]) |
| - | + | ||
|RELATEDENTRY=[[3djg|3djg]] | |RELATEDENTRY=[[3djg|3djg]] | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3djj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3djj OCA], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3djj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3djj OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3djj RCSB], [http://www.ebi.ac.uk/pdbsum/3djj PDBsum]</span> |
| - | + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/3djjA01 3Djja01], [http://www.cathdb.info/domain/3djjA02 3Djja02], [http://www.cathdb.info/domain/3djjA03 3Djja03]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001327 Ipr001327], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004099 Ipr004099], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006322 Ipr006322], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012999 Ipr012999], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013027 Ipr013027], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016156 Ipr016156], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR023753 Ipr023753]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00070 PF00070], [http://pfam.sanger.ac.uk/family?acc=PF02852 PF02852], [http://pfam.sanger.ac.uk/family?acc=PF07992 PF07992]</span> | |
| - | + | |uPDB=3DJJ|CONSURF={{!}}- | |
| - | + | ||
| - | |SARESOURCES=<span class='plainlinks'> | + | |
| - | |CONSURF={{!}}- | + | |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| - | {{!}} '''Toggle Conservation Colors:''' | ||
| - | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| - | Rows = identical sequences: | ||
| - | <jmol> | ||
| - | <jmolButton> | ||
| - | <script></script> | ||
| - | <text>A [x]</text> | ||
| - | <name>jmb_3djj_A</name> | ||
| - | <title>toggle chain A</title> | ||
| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| - | </jmolButton> | ||
| - | </jmol> | ||
}} | }} | ||
Current revision
| |||||||
| 3djj, resolution 1.10Å () | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , , , | ||||||
| Gene: | GSR, GLUR, GRD1 (HUMAN) | ||||||
| Activity: | Glutathione-disulfide reductase, with EC number 1.8.1.7 | ||||||
| Related: | 3djg | ||||||
| |||||||
| |||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||

