1hr6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:29, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1hr6.png|left|200px]]
 
-
<!--
+
==Yeast Mitochondrial Processing Peptidase==
-
The line below this paragraph, containing "STRUCTURE_1hr6", creates the "Structure Box" on the page.
+
<StructureSection load='1hr6' size='340' side='right'caption='[[1hr6]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1hr6]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HR6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1hr6| PDB=1hr6 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hr6 OCA], [https://pdbe.org/1hr6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hr6 RCSB], [https://www.ebi.ac.uk/pdbsum/1hr6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hr6 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Yeast Mitochondrial Processing Peptidase===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/MPPA_YEAST MPPA_YEAST] Cleaves presequences (transit peptides) from mitochondrial protein precursors. The cleavage sites typically contain an arginine at position -2 (in the N-terminal portion) from the scissible peptide bond in addition to other distal basic residues, and an aromatic residue at position +1.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_11470436}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11470436 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hr/1hr6_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_11470436}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1HR6 is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HR6 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hr6 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:11470436</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Mitochondrial processing peptidase]]
+
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Deisenhofer, J.]]
+
[[Category: Deisenhofer J]]
-
[[Category: Ito, A.]]
+
[[Category: Ito A]]
-
[[Category: Kitada, S.]]
+
[[Category: Kitada S]]
-
[[Category: Kojima, K.]]
+
[[Category: Kojima K]]
-
[[Category: Miyaura, H.]]
+
[[Category: Miyaura H]]
-
[[Category: Otwinowski, Z.]]
+
[[Category: Otwinowski Z]]
-
[[Category: Smith, B S.]]
+
[[Category: Smith BS]]
-
[[Category: Taylor, A B.]]
+
[[Category: Taylor AB]]
-
[[Category: Hxxeh zinc-binding motif]]
+
-
[[Category: Hydrolase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 13:46:02 2009''
+

Current revision

Yeast Mitochondrial Processing Peptidase

PDB ID 1hr6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1hr6"
Personal tools