1lu9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:26, 13 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1lu9.png|left|200px]]
 
-
<!--
+
==Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1==
-
The line below this paragraph, containing "STRUCTURE_1lu9", creates the "Structure Box" on the page.
+
<StructureSection load='1lu9' size='340' side='right'caption='[[1lu9]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1lu9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylorubrum_extorquens_AM1 Methylorubrum extorquens AM1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LU9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LU9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lu9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lu9 OCA], [https://pdbe.org/1lu9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lu9 RCSB], [https://www.ebi.ac.uk/pdbsum/1lu9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lu9 ProSAT]</span></td></tr>
-
{{STRUCTURE_1lu9| PDB=1lu9 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1===
+
[https://www.uniprot.org/uniprot/MTDA_METEA MTDA_METEA] Catalyzes the dehydrogenation of methylene-H(4)MPT. Can also catalyze the reversible dehydrogenation of methylene-H(4)F with 20-fold lower catalytic efficiency.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12176390}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12176390 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lu/1lu9_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_12176390}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lu9 ConSurf].
-
1LU9 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Methylobacterium_extorquens Methylobacterium extorquens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LU9 OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:12176390</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Methylobacterium extorquens]]
+
[[Category: Methylorubrum extorquens AM1]]
-
[[Category: Demmer, U.]]
+
[[Category: Demmer U]]
-
[[Category: Ermler, U.]]
+
[[Category: Ermler U]]
-
[[Category: Grabarse, W.]]
+
[[Category: Grabarse W]]
-
[[Category: Hagemeier, C H.]]
+
[[Category: Hagemeier CH]]
-
[[Category: Roth, A.]]
+
[[Category: Roth A]]
-
[[Category: Vorholt, J A.]]
+
[[Category: Vorholt JA]]
-
[[Category: Warkentin, E.]]
+
[[Category: Warkentin E]]
-
[[Category: Alpha/beta twisted open sheet structure]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 14:04:44 2009''
+

Current revision

Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1

PDB ID 1lu9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1lu9"
Personal tools