1z0d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:01, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1z0d.png|left|200px]]
 
-
<!--
+
==GDP-Bound Rab5c GTPase==
-
The line below this paragraph, containing "STRUCTURE_1z0d", creates the "Structure Box" on the page.
+
<StructureSection load='1z0d' size='340' side='right'caption='[[1z0d]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1z0d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z0D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_1z0d| PDB=1z0d | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z0d OCA], [https://pdbe.org/1z0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z0d RCSB], [https://www.ebi.ac.uk/pdbsum/1z0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z0d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RAB5C_MOUSE RAB5C_MOUSE] Protein transport. Probably involved in vesicular traffic (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z0/1z0d_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z0d ConSurf].
 +
<div style="clear:both"></div>
-
===GDP-Bound Rab5c GTPase===
+
==See Also==
-
 
+
*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16034420}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16034420 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16034420}}
+
-
 
+
-
==About this Structure==
+
-
1Z0D is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z0D OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16034420</ref><references group="xtra"/>
+
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Eathiraj, S.]]
+
[[Category: Eathiraj S]]
-
[[Category: Lambright, D G.]]
+
[[Category: Lambright DG]]
-
[[Category: Pan, X.]]
+
[[Category: Pan X]]
-
[[Category: Ritacco, C.]]
+
[[Category: Ritacco C]]
-
[[Category: Protein transport]]
+
-
[[Category: Rab gtpase]]
+
-
[[Category: Rab5c]]
+
-
[[Category: Vesicular trafficking]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 14:21:24 2009''
+

Current revision

GDP-Bound Rab5c GTPase

PDB ID 1z0d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1z0d"
Personal tools