2fl0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:24, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2fl0.png|left|200px]]
 
-
<!--
+
==Oxidized (All ferric) form of the Azotobacter vinelandii bacterioferritin==
-
The line below this paragraph, containing "STRUCTURE_2fl0", creates the "Structure Box" on the page.
+
<StructureSection load='2fl0' size='340' side='right'caption='[[2fl0]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2fl0]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FL0 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_2fl0| PDB=2fl0 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fl0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fl0 OCA], [https://pdbe.org/2fl0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fl0 RCSB], [https://www.ebi.ac.uk/pdbsum/2fl0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fl0 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BFR_AZOVI BFR_AZOVI] Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fl/2fl0_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fl0 ConSurf].
 +
<div style="clear:both"></div>
-
===Oxidized (All ferric) form of the Azotobacter vinelandii bacterioferritin===
+
==See Also==
-
 
+
*[[Ferritin 3D structures|Ferritin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16584178}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 16584178 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16584178}}
+
-
 
+
-
==About this Structure==
+
-
2FL0 is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FL0 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16584178</ref><references group="xtra"/>
+
[[Category: Azotobacter vinelandii]]
[[Category: Azotobacter vinelandii]]
-
[[Category: Kunchinskas, K.]]
+
[[Category: Large Structures]]
-
[[Category: Lanzilotta, W N.]]
+
[[Category: Kunchinskas K]]
-
[[Category: Li, H.]]
+
[[Category: Lanzilotta WN]]
-
[[Category: Poulos, T L.]]
+
[[Category: Li H]]
-
[[Category: Swartz, L.]]
+
[[Category: Poulos TL]]
-
[[Category: Bacterioferritin]]
+
[[Category: Swartz L]]
-
[[Category: Diiron site]]
+
-
[[Category: Ferritin]]
+
-
[[Category: Iron transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 14:34:05 2009''
+

Current revision

Oxidized (All ferric) form of the Azotobacter vinelandii bacterioferritin

PDB ID 2fl0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools