2ey4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:20, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ey4.png|left|200px]]
 
-
<!--
+
==Crystal Structure of a Cbf5-Nop10-Gar1 Complex==
-
The line below this paragraph, containing "STRUCTURE_2ey4", creates the "Structure Box" on the page.
+
<StructureSection load='2ey4' size='340' side='right'caption='[[2ey4]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ey4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus] and [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EY4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EY4 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2ey4| PDB=2ey4 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ey4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ey4 OCA], [https://pdbe.org/2ey4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ey4 RCSB], [https://www.ebi.ac.uk/pdbsum/2ey4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ey4 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8U029_PYRFU Q8U029_PYRFU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ey/2ey4_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ey4 ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of a Cbf5-Nop10-Gar1 Complex===
+
==See Also==
-
 
+
*[[Guide-independent Pseudouridine synthase|Guide-independent Pseudouridine synthase]]
-
 
+
*[[Pseudouridine synthase 3D structures|Pseudouridine synthase 3D structures]]
-
<!--
+
*[[Ribosome biogenesis protein 3D structures|Ribosome biogenesis protein 3D structures]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_16427014}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 16427014 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_16427014}}
+
-
 
+
-
==About this Structure==
+
-
2EY4 is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus] and [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EY4 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16427014</ref><references group="xtra"/>
+
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Pyrococcus furiosus dsm 3638]]
+
[[Category: Pyrococcus furiosus DSM 3638]]
-
[[Category: Li, H.]]
+
[[Category: Li H]]
-
[[Category: Liang, B.]]
+
[[Category: Liang B]]
-
[[Category: Rashid, R.]]
+
[[Category: Rashid R]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Secsg]]
+
-
[[Category: Southeast collaboratory for structural genomic]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Trimeric complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 14:35:29 2009''
+

Current revision

Crystal Structure of a Cbf5-Nop10-Gar1 Complex

PDB ID 2ey4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools