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1y0p

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(New page: 200px<br /><applet load="1y0p" size="450" color="white" frame="true" align="right" spinBox="true" caption="1y0p, resolution 1.50&Aring;" /> '''Flavocytochrome c3 w...)
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[[Image:1y0p.gif|left|200px]]<br /><applet load="1y0p" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1y0p, resolution 1.50&Aring;" />
 
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'''Flavocytochrome c3 with mesaconate bound'''<br />
 
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==About this Structure==
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==Flavocytochrome c3 with mesaconate bound==
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1Y0P is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Shewanella_frigidimarina Shewanella frigidimarina] with NA, HEM, FAD and MEZ as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Succinate_dehydrogenase Succinate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.99.1 1.3.99.1] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Y0P OCA].
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<StructureSection load='1y0p' size='340' side='right'caption='[[1y0p]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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[[Category: Shewanella frigidimarina]]
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== Structural highlights ==
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[[Category: Single protein]]
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<table><tr><td colspan='2'>[[1y0p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_frigidimarina Shewanella frigidimarina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y0P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y0P FirstGlance]. <br>
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[[Category: Succinate dehydrogenase]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
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[[Category: Chapman, S.K.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MEZ:(2E)-2-METHYLBUT-2-ENEDIOIC+ACID'>MEZ</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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[[Category: Mowat, C.G.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y0p OCA], [https://pdbe.org/1y0p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y0p RCSB], [https://www.ebi.ac.uk/pdbsum/1y0p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y0p ProSAT]</span></td></tr>
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[[Category: Reid, G.A.]]
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</table>
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[[Category: Wardrope, C.]]
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== Function ==
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[[Category: FAD]]
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[https://www.uniprot.org/uniprot/FCCA_SHEFR FCCA_SHEFR] Flavocytochrome that catalyzes the reduction of fumarate to succinate (PubMed:10978153). Is essential for fumarate respiration during anaerobic growth, acting as the terminal reductase (By similarity). Receives electrons from the membrane-bound tetraheme c-type cytochrome CymA (By similarity). In vitro, can use the artificial electron donor methyl viologen (PubMed:10978153).[UniProtKB:P83223][UniProtKB:Q07WU7]<ref>PMID:10978153</ref>
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[[Category: HEM]]
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== Evolutionary Conservation ==
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[[Category: MEZ]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: NA]]
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Check<jmol>
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[[Category: flavocytochrome]]
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<jmolCheckbox>
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[[Category: fumarate reductase]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y0/1y0p_consurf.spt"</scriptWhenChecked>
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[[Category: mesaconate]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y0p ConSurf].
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<div style="clear:both"></div>
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 06:28:43 2007''
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==See Also==
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*[[Flavocytochrome 3D structures|Flavocytochrome 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Shewanella frigidimarina]]
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[[Category: Chapman SK]]
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[[Category: Mowat CG]]
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[[Category: Reid GA]]
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[[Category: Wardrope C]]

Current revision

Flavocytochrome c3 with mesaconate bound

PDB ID 1y0p

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