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2g5b

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{{Seed}}
 
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[[Image:2g5b.png|left|200px]]
 
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==Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide.==
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The line below this paragraph, containing "STRUCTURE_2g5b", creates the "Structure Box" on the page.
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<StructureSection load='2g5b' size='340' side='right'caption='[[2g5b]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2g5b]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G5B FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
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-->
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g5b OCA], [https://pdbe.org/2g5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g5b RCSB], [https://www.ebi.ac.uk/pdbsum/2g5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g5b ProSAT]</span></td></tr>
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{{STRUCTURE_2g5b| PDB=2g5b | SCENE= }}
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g5/2g5b_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g5b ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The Bcl-2 family member Bax plays a critical role in apoptosis. In healthy resting cells, Bax resides in the cytoplasm and loosely attached to the mitochondrial membrane. Apoptotic stimuli induce Bax activation, which is characterized by translocation and multimerization on the mitochondrial membrane surface resulting in exposure of an amino terminal epitope recognized by the monoclonal antibody 6A7. To understand the structural changes that occur during Bax activation, we determined the crystal structure of a Bax peptide bound to the 6A7 Fab fragment to a resolution of 2.3 A. The structure reveals the conformation of the 6A7 peptide epitope on Bax in the activated form and elucidates the extensive structural changes that Bax must undergo during the conversion from its native to its activated conformation.
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===Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide.===
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Elucidation of some Bax conformational changes through crystallization of an antibody-peptide complex.,Peyerl FW, Dai S, Murphy GA, Crawford F, White J, Marrack P, Kappler JW Cell Death Differ. 2007 Mar;14(3):447-52. Epub 2006 Sep 1. PMID:16946732<ref>PMID:16946732</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<!--
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_16946732}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2g5b" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 16946732 is the PubMed ID number.
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== References ==
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-->
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<references/>
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{{ABSTRACT_PUBMED_16946732}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2G5B is a 12 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G5B OCA].
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[[Category: Lk3 transgenic mice]]
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[[Category: Dai, S]]
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==Reference==
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[[Category: Kappler, J W]]
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<ref group="xtra">PMID:16946732</ref><references group="xtra"/>
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[[Category: Marrack, P]]
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[[Category: Mus musculus]]
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[[Category: Murphy, G A]]
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[[Category: Dai, S.]]
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[[Category: Peyerl, F W]]
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[[Category: Kappler, J W.]]
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[[Category: Marrack, P.]]
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[[Category: Murphy, G A.]]
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[[Category: Peyerl, F W.]]
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[[Category: 6a7]]
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[[Category: Antibody]]
[[Category: Antibody]]
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[[Category: Apoptosis]]
[[Category: Bax]]
[[Category: Bax]]
[[Category: Fab]]
[[Category: Fab]]
[[Category: Fab-peptide complex]]
[[Category: Fab-peptide complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:38:10 2009''
 

Current revision

Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide.

PDB ID 2g5b

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