This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1c52

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:38, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1c52.png|left|200px]]
 
-
<!--
+
==THERMUS THERMOPHILUS CYTOCHROME-C552: A NEW HIGHLY THERMOSTABLE CYTOCHROME-C STRUCTURE OBTAINED BY MAD PHASING==
-
The line below this paragraph, containing "STRUCTURE_1c52", creates the "Structure Box" on the page.
+
<StructureSection load='1c52' size='340' side='right'caption='[[1c52]], [[Resolution|resolution]] 1.28&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1c52]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C52 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C52 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.28&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
{{STRUCTURE_1c52| PDB=1c52 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c52 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c52 OCA], [https://pdbe.org/1c52 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c52 RCSB], [https://www.ebi.ac.uk/pdbsum/1c52 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c52 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CY552_THETH CY552_THETH] This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c5/1c52_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1c52 ConSurf].
 +
<div style="clear:both"></div>
-
===THERMUS THERMOPHILUS CYTOCHROME-C552: A NEW HIGHLY THERMOSTABLE CYTOCHROME-C STRUCTURE OBTAINED BY MAD PHASING===
+
==See Also==
-
 
+
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_9281430}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 9281430 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_9281430}}
+
-
 
+
-
==About this Structure==
+
-
1C52 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C52 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:9281430</ref><references group="xtra"/>
+
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
-
[[Category: Bartunik, H D.]]
+
[[Category: Bartunik HD]]
-
[[Category: Bourenkov, G P.]]
+
[[Category: Bourenkov GP]]
-
[[Category: Buse, G.]]
+
[[Category: Buse G]]
-
[[Category: Hof, P.]]
+
[[Category: Hof P]]
-
[[Category: Huber, R.]]
+
[[Category: Huber R]]
-
[[Category: Soulimane, T.]]
+
[[Category: Soulimane T]]
-
[[Category: Than, M E.]]
+
[[Category: Than ME]]
-
[[Category: Cytochrome-c552]]
+
-
[[Category: Electron transport protein]]
+
-
[[Category: Mad]]
+
-
[[Category: Thermostability]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:42:23 2009''
+

Current revision

THERMUS THERMOPHILUS CYTOCHROME-C552: A NEW HIGHLY THERMOSTABLE CYTOCHROME-C STRUCTURE OBTAINED BY MAD PHASING

PDB ID 1c52

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1c52"
Personal tools