This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1aoz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:26, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1aoz.png|left|200px]]
 
-
<!--
+
==REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION==
-
The line below this paragraph, containing "STRUCTURE_1aoz", creates the "Structure Box" on the page.
+
<StructureSection load='1aoz' size='340' side='right'caption='[[1aoz]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1aoz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cucurbita_pepo_var._melopepo Cucurbita pepo var. melopepo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AOZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AOZ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C1O:CU-O+LINKAGE'>C1O</scene>, <scene name='pdbligand=C2O:CU-O-CU+LINKAGE'>C2O</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
{{STRUCTURE_1aoz| PDB=1aoz | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1aoz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aoz OCA], [https://pdbe.org/1aoz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1aoz RCSB], [https://www.ebi.ac.uk/pdbsum/1aoz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aoz ProSAT]</span></td></tr>
-
 
+
</table>
-
===REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/ASO_CUCPM ASO_CUCPM] May be involved in a redox system involving ascorbic acid.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_1548698}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 1548698 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ao/1aoz_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_1548698}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1AOZ is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Cucurbita_pepo_var._melopepo Cucurbita pepo var. melopepo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AOZ OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aoz ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:1548698</ref><references group="xtra"/>
+
</StructureSection>
[[Category: Cucurbita pepo var. melopepo]]
[[Category: Cucurbita pepo var. melopepo]]
-
[[Category: L-ascorbate oxidase]]
+
[[Category: Large Structures]]
-
[[Category: Huber, R.]]
+
[[Category: Huber R]]
-
[[Category: Ladenstein, R.]]
+
[[Category: Ladenstein R]]
-
[[Category: Messerschmidt, A.]]
+
[[Category: Messerschmidt A]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:57:36 2009''
+

Current revision

REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION

PDB ID 1aoz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1aoz"
Personal tools