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1oul

From Proteopedia

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{{Seed}}
 
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[[Image:1oul.png|left|200px]]
 
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==Structure of the AAA+ protease delivery protein SspB==
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The line below this paragraph, containing "STRUCTURE_1oul", creates the "Structure Box" on the page.
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<StructureSection load='1oul' size='340' side='right'caption='[[1oul]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1oul]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OUL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OUL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_1oul| PDB=1oul | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oul FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oul OCA], [https://pdbe.org/1oul PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oul RCSB], [https://www.ebi.ac.uk/pdbsum/1oul PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oul ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SSPB_HAEIN SSPB_HAEIN] Enhances recognition of ssrA-tagged proteins by the ClpX-ClpP protease; the ssrA degradation tag (AANDENYALAA) is added trans-translationally to proteins that are stalled on the ribosome, freeing the ribosome and targeting stalled peptides for degradation. SspB activates the ATPase activity of ClpX. Seems to act in concert with SspA in the regulation of several proteins during exponential and stationary-phase growth (By similarity). Also stimulates degradation of the N-terminus of RseA (residues 1-108, alone or in complex with sigma-E) by ClpX-ClpP in a non-ssrA-mediated fashion (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ou/1oul_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1oul ConSurf].
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<div style="clear:both"></div>
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===Structure of the AAA+ protease delivery protein SspB===
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==See Also==
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*[[Stringent starvation protein 3D structures|Stringent starvation protein 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_14536076}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 14536076 is the PubMed ID number.
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{{ABSTRACT_PUBMED_14536076}}
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==About this Structure==
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1OUL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OUL OCA].
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==Reference==
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<ref group="xtra">PMID:14536076</ref><references group="xtra"/>
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[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
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[[Category: Baker, T A.]]
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[[Category: Large Structures]]
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[[Category: Grant, R A.]]
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[[Category: Baker TA]]
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[[Category: Levchenko, I.]]
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[[Category: Grant RA]]
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[[Category: Sauer, R T.]]
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[[Category: Levchenko I]]
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[[Category: Wah, D A.]]
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[[Category: Sauer RT]]
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[[Category: Homodimer]]
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[[Category: Wah DA]]
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[[Category: Ssra peptide binding protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:59:56 2009''
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Current revision

Structure of the AAA+ protease delivery protein SspB

PDB ID 1oul

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