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1h7q

From Proteopedia

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{{Seed}}
 
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[[Image:1h7q.png|left|200px]]
 
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==dTDP-MANGANESE COMPLEX OF SPSA FROM BACILLUS SUBTILIS==
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The line below this paragraph, containing "STRUCTURE_1h7q", creates the "Structure Box" on the page.
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<StructureSection load='1h7q' size='340' side='right'caption='[[1h7q]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1h7q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H7Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H7Q FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=TYD:THYMIDINE-5-DIPHOSPHATE'>TYD</scene></td></tr>
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{{STRUCTURE_1h7q| PDB=1h7q | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h7q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h7q OCA], [https://pdbe.org/1h7q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h7q RCSB], [https://www.ebi.ac.uk/pdbsum/1h7q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h7q ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SPSA_BACSU SPSA_BACSU] Glycosyltransferase implicated in the synthesis of the spore coat.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h7/1h7q_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h7q ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The vast majority of glycosidic-bond synthesis in nature is performed by glycosyltransferases, which use activated glycosides as the sugar donor. Typically, the activated leaving group is a nucleoside phosphate, lipid phosphate or phosphate. The nucleotide-sugar-dependent glycosyltransferases fall into over 50 sequence-based families, with the largest and most widespread family of inverting transferases named family GT-2. Here, we present the three-dimensional crystal structure of SpsA, the first and currently the only structural representative from family GT-2, in complex with both Mn-dTDP and Mg-dTDP at a resolution of 2 A. These structures reveal how SpsA and related enzymes may display nucleotide plasticity and permit a comparison of the catalytic centre of this enzyme with those from related sequence families whose three-dimensional structures have recently been determined. Family GT-2 enzymes, together with enzymes from families 7, 13 and 43, appear to form a clan of related structures with identical catalytic apparatus and reaction mechanism.
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===DTDP-MANGANESE COMPLEX OF SPSA FROM BACILLUS SUBTILIS===
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Three-dimensional structures of the Mn and Mg dTDP complexes of the family GT-2 glycosyltransferase SpsA: a comparison with related NDP-sugar glycosyltransferases.,Tarbouriech N, Charnock SJ, Davies GJ J Mol Biol. 2001 Dec 7;314(4):655-61. PMID:11733986<ref>PMID:11733986</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_11733986}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1h7q" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 11733986 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_11733986}}
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__TOC__
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</StructureSection>
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==About this Structure==
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1H7Q is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H7Q OCA].
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==Reference==
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<ref group="xtra">PMID:11733986</ref><references group="xtra"/>
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[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
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[[Category: Charnock, S J.]]
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[[Category: Large Structures]]
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[[Category: Davies, G J.]]
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[[Category: Charnock SJ]]
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[[Category: Tarbouriech, N.]]
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[[Category: Davies GJ]]
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[[Category: Glycosyltransferase]]
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[[Category: Tarbouriech N]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 16:05:03 2009''
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Current revision

dTDP-MANGANESE COMPLEX OF SPSA FROM BACILLUS SUBTILIS

PDB ID 1h7q

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