This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ecu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:25, 3 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2ecu.png|left|200px]]
 
-
<!--
+
==Crystal structure of flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase==
-
The line below this paragraph, containing "STRUCTURE_2ecu", creates the "Structure Box" on the page.
+
<StructureSection load='2ecu' size='340' side='right'caption='[[2ecu]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2ecu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ECU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ECU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=12P:DODECAETHYLENE+GLYCOL'>12P</scene>, <scene name='pdbligand=1PG:2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL'>1PG</scene></td></tr>
-
{{STRUCTURE_2ecu| PDB=2ecu | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ecu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ecu OCA], [https://pdbe.org/2ecu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ecu RCSB], [https://www.ebi.ac.uk/pdbsum/2ecu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ecu ProSAT], [https://www.topsan.org/Proteins/RSGI/2ecu TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/HPAC_THET8 HPAC_THET8] Catalyzes the reduction of free flavins (FMN, FAD and riboflavin) by NADH. Subsequently, the reduced flavins diffuse to the large HpaB component.<ref>PMID:17729270</ref>
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_17729270}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17729270 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ec/2ecu_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_17729270}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2ECU is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ECU OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ecu ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
== References ==
-
<ref group="xtra">PMID:17729270</ref><references group="xtra"/>
+
<references/>
-
[[Category: Thermus thermophilus]]
+
__TOC__
-
[[Category: Ebihara, A.]]
+
</StructureSection>
-
[[Category: Hisano, T.]]
+
[[Category: Large Structures]]
-
[[Category: Iwasaki, W.]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Kim, S H.]]
+
[[Category: Ebihara A]]
-
[[Category: Miki, K.]]
+
[[Category: Hisano T]]
-
[[Category: Flavin diffusible]]
+
[[Category: Iwasaki W]]
-
[[Category: Flavin reductase]]
+
[[Category: Kim SH]]
-
[[Category: Oxidoreductase]]
+
[[Category: Miki K]]
-
[[Category: Two-component monooxygenase]]
+
-
[[Category: X-ray diffraction]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 17:27:01 2009''
+

Current revision

Crystal structure of flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase

PDB ID 2ecu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ecu"
Personal tools