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1ni1

From Proteopedia

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{{Seed}}
 
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[[Image:1ni1.png|left|200px]]
 
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<!--
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==Imidazole and cyanophenyl farnesyl transferase inhibitors==
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The line below this paragraph, containing "STRUCTURE_1ni1", creates the "Structure Box" on the page.
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<StructureSection load='1ni1' size='340' side='right'caption='[[1ni1]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1ni1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NI1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NI1 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2C5:2-CHLORO-5-(3-CHLORO-PHENYL)-6-[(4-CYANO-PHENYL)-(3-METHYL-3H-IMIDAZOL-4-YL)-+METHOXYMETHYL]-NICOTINONITRILE'>2C5</scene>, <scene name='pdbligand=HFP:ALPHA-HYDROXYFARNESYLPHOSPHONIC+ACID'>HFP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_1ni1| PDB=1ni1 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ni1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ni1 OCA], [https://pdbe.org/1ni1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ni1 RCSB], [https://www.ebi.ac.uk/pdbsum/1ni1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ni1 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/FNTA_RAT FNTA_RAT] Catalyzes the transfer of a farnesyl or geranyl-geranyl moiety from farnesyl or geranyl-geranyl pyrophosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. The alpha subunit is thought to participate in a stable complex with the substrate. The beta subunit binds the peptide substrate. Through RAC1 prenylation and activation may positively regulate neuromuscular junction development downstream of MUSK (By similarity).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/1ni1_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ni1 ConSurf].
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<div style="clear:both"></div>
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===Imidazole and cyanophenyl farnesyl transferase inhibitors===
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==See Also==
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*[[Farnesyltransferase 3D structures|Farnesyltransferase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12699757}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12699757 is the PubMed ID number.
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-->
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{{ABSTRACT_PUBMED_12699757}}
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==About this Structure==
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1NI1 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NI1 OCA].
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==Reference==
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<ref group="xtra">PMID:12699757</ref><references group="xtra"/>
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[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
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[[Category: Bauch, J.]]
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[[Category: Bauch J]]
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[[Category: Cohen, J.]]
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[[Category: Cohen J]]
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[[Category: Gu, W Z.]]
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[[Category: Gu WZ]]
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[[Category: Hasvold, L.]]
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[[Category: Hasvold L]]
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[[Category: Leonard, N.]]
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[[Category: Leonard N]]
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[[Category: Li, Q.]]
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[[Category: Li Q]]
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[[Category: Li, T.]]
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[[Category: Li T]]
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[[Category: Lin, N H.]]
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[[Category: Lin NH]]
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[[Category: Marsh, K.]]
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[[Category: Marsh K]]
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[[Category: Rosenberg, S H.]]
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[[Category: Rosenberg SH]]
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[[Category: Sham, H L.]]
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[[Category: Sham HL]]
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[[Category: Stoll, V.]]
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[[Category: Stoll V]]
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[[Category: Tong, Y.]]
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[[Category: Tong Y]]
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[[Category: Wang, L.]]
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[[Category: Wang L]]
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[[Category: Wang, W.]]
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[[Category: Wang W]]
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[[Category: Zhang, H.]]
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[[Category: Zhang H]]
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[[Category: Cyanophenyl]]
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[[Category: Ftase]]
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[[Category: Prenyltransferase]]
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[[Category: Transferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 17:31:25 2009''
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Current revision

Imidazole and cyanophenyl farnesyl transferase inhibitors

PDB ID 1ni1

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