This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1kam
From Proteopedia
(Difference between revisions)
| (10 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:1kam.png|left|200px]] | ||
| - | + | ==Structure of Bacillus subtilis Nicotinic Acid Mononucleotide Adenylyl Transferase== | |
| - | + | <StructureSection load='1kam' size='340' side='right'caption='[[1kam]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1kam]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KAM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KAM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kam OCA], [https://pdbe.org/1kam PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kam RCSB], [https://www.ebi.ac.uk/pdbsum/1kam PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kam ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/NADD_BACSU NADD_BACSU] Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | < | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ka/1kam_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | == | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kam ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | + | __TOC__ | |
| - | == | + | </StructureSection> |
| - | < | + | |
[[Category: Bacillus subtilis]] | [[Category: Bacillus subtilis]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Aulabaugh | + | [[Category: Aulabaugh A]] |
| - | [[Category: Bard | + | [[Category: Bard J]] |
| - | [[Category: Chopra | + | [[Category: Chopra R]] |
| - | [[Category: Czerwinski | + | [[Category: Czerwinski RM]] |
| - | [[Category: Lo | + | [[Category: Lo MC]] |
| - | [[Category: Olland | + | [[Category: Olland AM]] |
| - | [[Category: Somers | + | [[Category: Somers WS]] |
| - | [[Category: Stahl | + | [[Category: Stahl ML]] |
| - | [[Category: Sullivan | + | [[Category: Sullivan FX]] |
| - | [[Category: Underwood | + | [[Category: Underwood KW]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Structure of Bacillus subtilis Nicotinic Acid Mononucleotide Adenylyl Transferase
| |||||||||||
Categories: Bacillus subtilis | Large Structures | Aulabaugh A | Bard J | Chopra R | Czerwinski RM | Lo MC | Olland AM | Somers WS | Stahl ML | Sullivan FX | Underwood KW

