2pr0

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{{Seed}}
 
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[[Image:2pr0.png|left|200px]]
 
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==Crystal structure of Sylvaticin, a new secreted protein from Pythium Sylvaticum==
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The line below this paragraph, containing "STRUCTURE_2pr0", creates the "Structure Box" on the page.
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<StructureSection load='2pr0' size='340' side='right'caption='[[2pr0]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2pr0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pythium_sylvaticum Pythium sylvaticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PR0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PR0 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2pos|2pos]]</div></td></tr>
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{{STRUCTURE_2pr0| PDB=2pr0 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pr0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pr0 OCA], [https://pdbe.org/2pr0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pr0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pr0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pr0 ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pr/2pr0_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pr0 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The structure of sylvaticin, a 10 kDa major pythin protein excreted by the parasitic oomycete Pythium sylvaticum, has been determined. Although closely related to alpha-elicitins in its biological response, toxicity and overall structure, sylvaticin presents a number of structural features that make it an unusual member of the elicitin class. Elicitins possess a large hydrophobic cavity and the mechanism of the systemic acquired resistance induced in planta is known to proceed through lipid transport and complexation within this cavity. Unlike other elicitins, sylvaticin contains tryptophan residues, one of which points inwards towards the central cavity, thus limiting access to sterols. In the case of sylvaticin, the sterol-transport mechanism is likely to be of less importance compared with other members of the elicitin family and still remains to be fully characterized.
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===Crystal structure of Sylvaticin, a new secreted protein from Pythium Sylvaticum===
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Structure of sylvaticin, a new alpha-elicitin-like protein from Pythium sylvaticum.,Lascombe MB, Retailleau P, Ponchet M, Industri B, Blein JP, Prange T Acta Crystallogr D Biol Crystallogr. 2007 Oct;63(Pt 10):1102-8. Epub 2007, Sep 19. PMID:17881828<ref>PMID:17881828</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17881828}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2pr0" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17881828 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17881828}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2PR0 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pythium_sylvaticum Pythium sylvaticum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PR0 OCA].
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==Reference==
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<ref group="xtra">PMID:17881828</ref><references group="xtra"/>
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[[Category: Pythium sylvaticum]]
[[Category: Pythium sylvaticum]]
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[[Category: Lascombe, M B.]]
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[[Category: Lascombe, M B]]
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[[Category: Prange, T.]]
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[[Category: Prange, T]]
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[[Category: Retailleau, P.]]
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[[Category: Retailleau, P]]
[[Category: Elicitin]]
[[Category: Elicitin]]
[[Category: Toxin]]
[[Category: Toxin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 18:02:56 2009''
 

Current revision

Crystal structure of Sylvaticin, a new secreted protein from Pythium Sylvaticum

PDB ID 2pr0

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