This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1x8g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:18, 3 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1x8g.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the Mono-Zinc Carbapenemase CphA from Aeromonas Hydrophyla==
-
The line below this paragraph, containing "STRUCTURE_1x8g", creates the "Structure Box" on the page.
+
<StructureSection load='1x8g' size='340' side='right'caption='[[1x8g]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1x8g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X8G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X8G FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1x8g| PDB=1x8g | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x8g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x8g OCA], [https://pdbe.org/1x8g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x8g RCSB], [https://www.ebi.ac.uk/pdbsum/1x8g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x8g ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BLAB_AERHY BLAB_AERHY] Can hydrolyze carbapenem compounds.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x8/1x8g_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x8g ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of the Mono-Zinc Carbapenemase CphA from Aeromonas Hydrophyla===
+
==See Also==
-
 
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15588826}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 15588826 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_15588826}}
+
-
 
+
-
==About this Structure==
+
-
1X8G is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X8G OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:15588826</ref><ref group="xtra">PMID:15215079</ref><ref group="xtra">PMID:7588620</ref><ref group="xtra">PMID:12507470</ref><references group="xtra"/>
+
[[Category: Aeromonas hydrophila]]
[[Category: Aeromonas hydrophila]]
-
[[Category: Beta-lactamase]]
+
[[Category: Large Structures]]
-
[[Category: Dideberg, O.]]
+
[[Category: Dideberg O]]
-
[[Category: Garau, G.]]
+
[[Category: Garau G]]
-
[[Category: Hydrolase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 19:58:51 2009''
+

Current revision

Crystal Structure of the Mono-Zinc Carbapenemase CphA from Aeromonas Hydrophyla

PDB ID 1x8g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools