1z7y

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(New page: 200px<br /><applet load="1z7y" size="450" color="white" frame="true" align="right" spinBox="true" caption="1z7y, resolution 2.7&Aring;" /> '''Crystal Structure of ...)
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[[Image:1z7y.gif|left|200px]]<br /><applet load="1z7y" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1z7y, resolution 2.7&Aring;" />
 
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'''Crystal Structure of the Arabidopsis thaliana O-Acetylserine Sulfhydrylase K46A mutant'''<br />
 
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==Overview==
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==Crystal Structure of the Arabidopsis thaliana O-Acetylserine Sulfhydrylase K46A mutant==
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In plants, cysteine biosynthesis plays a central role in fixing inorganic, sulfur from the environment and provides the only metabolic sulfide donor, for the generation of methionine, glutathione, phytochelatins, iron-sulfur, clusters, vitamin cofactors, and multiple secondary metabolites., O-Acetylserine sulfhydrylase (OASS) catalyzes the final step of cysteine, biosynthesis, the pyridoxal 5'-phosphate (PLP)-dependent conversion of, O-acetylserine into cysteine. Here we describe the 2.2 A resolution, crystal structure of OASS from Arabidopsis thaliana (AtOASS) and the 2.7 A, resolution structure of the AtOASS K46A mutant with PLP and methionine, covalently linked as an external aldimine in the active site. Although the, plant and bacterial OASS share a conserved set of amino acids for PLP, binding, the structure of AtOASS reveals a difference from the bacterial, enzyme in the positioning of an active site loop formed by residues 74-78, when methionine is bound. Site-directed mutagenesis, kinetic analysis, and, ligand binding titrations probed the functional roles of active site, residues. These experiments indicate that Asn(77) and Gln(147) are key, amino acids for O-acetylserine binding and that Thr(74) and Ser(75) are, involved in sulfur incorporation into cysteine. In addition, examination, of the AtOASS structure and nearly 300 plant and bacterial OASS sequences, suggest that the highly conserved beta8A-beta9A surface loop may be, important for interaction with serine acetyltransferase, the other enzyme, in cysteine biosynthesis. Initial protein-protein interaction experiments, using AtOASS mutants targeted to this loop support this hypothesis.
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<StructureSection load='1z7y' size='340' side='right'caption='[[1z7y]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1z7y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z7Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z7Y FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AA5:N-[(3-HYDROXY-2-METHYL-5-{[(TRIHYDROXYPHOSPHORANYL)OXY]METHYL}PYRIDIN-4-YL)METHYLENE]METHIONINE'>AA5</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z7y OCA], [https://pdbe.org/1z7y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z7y RCSB], [https://www.ebi.ac.uk/pdbsum/1z7y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z7y ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CYSK1_ARATH CYSK1_ARATH]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z7/1z7y_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z7y ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In plants, cysteine biosynthesis plays a central role in fixing inorganic sulfur from the environment and provides the only metabolic sulfide donor for the generation of methionine, glutathione, phytochelatins, iron-sulfur clusters, vitamin cofactors, and multiple secondary metabolites. O-Acetylserine sulfhydrylase (OASS) catalyzes the final step of cysteine biosynthesis, the pyridoxal 5'-phosphate (PLP)-dependent conversion of O-acetylserine into cysteine. Here we describe the 2.2 A resolution crystal structure of OASS from Arabidopsis thaliana (AtOASS) and the 2.7 A resolution structure of the AtOASS K46A mutant with PLP and methionine covalently linked as an external aldimine in the active site. Although the plant and bacterial OASS share a conserved set of amino acids for PLP binding, the structure of AtOASS reveals a difference from the bacterial enzyme in the positioning of an active site loop formed by residues 74-78 when methionine is bound. Site-directed mutagenesis, kinetic analysis, and ligand binding titrations probed the functional roles of active site residues. These experiments indicate that Asn(77) and Gln(147) are key amino acids for O-acetylserine binding and that Thr(74) and Ser(75) are involved in sulfur incorporation into cysteine. In addition, examination of the AtOASS structure and nearly 300 plant and bacterial OASS sequences suggest that the highly conserved beta8A-beta9A surface loop may be important for interaction with serine acetyltransferase, the other enzyme in cysteine biosynthesis. Initial protein-protein interaction experiments using AtOASS mutants targeted to this loop support this hypothesis.
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==About this Structure==
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Molecular basis of cysteine biosynthesis in plants: structural and functional analysis of O-acetylserine sulfhydrylase from Arabidopsis thaliana.,Bonner ER, Cahoon RE, Knapke SM, Jez JM J Biol Chem. 2005 Nov 18;280(46):38803-13. Epub 2005 Sep 15. PMID:16166087<ref>PMID:16166087</ref>
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1Z7Y is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana] with AA5 as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Cysteine_synthase Cysteine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.47 2.5.1.47] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Z7Y OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Molecular basis of cysteine biosynthesis in plants: structural and functional analysis of O-acetylserine sulfhydrylase from Arabidopsis thaliana., Bonner ER, Cahoon RE, Knapke SM, Jez JM, J Biol Chem. 2005 Nov 18;280(46):38803-13. Epub 2005 Sep 15. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16166087 16166087]
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</div>
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<div class="pdbe-citations 1z7y" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
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[[Category: Cysteine synthase]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Bonner ER]]
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[[Category: Bonner, E.R.]]
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[[Category: Cahoon RE]]
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[[Category: Cahoon, R.E.]]
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[[Category: Jez JM]]
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[[Category: Jez, J.M.]]
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[[Category: Knapke SM]]
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[[Category: Knapke, S.M.]]
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[[Category: AA5]]
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[[Category: transferase]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 07:17:32 2007''
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Current revision

Crystal Structure of the Arabidopsis thaliana O-Acetylserine Sulfhydrylase K46A mutant

PDB ID 1z7y

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