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1z9d
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1z9d" size="450" color="white" frame="true" align="right" spinBox="true" caption="1z9d, resolution 2.80Å" /> '''Crystal structure of...) |
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| - | [[Image:1z9d.gif|left|200px]]<br /><applet load="1z9d" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1z9d, resolution 2.80Å" /> | ||
| - | '''Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes'''<br /> | ||
| - | == | + | ==Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes== |
| - | + | <StructureSection load='1z9d' size='340' side='right'caption='[[1z9d]], [[Resolution|resolution]] 2.80Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1z9d]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z9D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z9D FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z9d OCA], [https://pdbe.org/1z9d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z9d RCSB], [https://www.ebi.ac.uk/pdbsum/1z9d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z9d ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1z9d TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/PYRH_STRP1 PYRH_STRP1] Catalyzes the reversible phosphorylation of UMP to UDP (By similarity). | |
| - | [ | + | == Evolutionary Conservation == |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z9/1z9d_consurf.spt"</scriptWhenChecked> |
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z9d ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Uridylate kinase|Uridylate kinase]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Streptococcus pyogenes]] | ||
| + | [[Category: Burley SK]] | ||
| + | [[Category: Kniewel R]] | ||
| + | [[Category: Lee K]] | ||
| + | [[Category: Lima CD]] | ||
| + | [[Category: Rajashankar KR]] | ||
Current revision
Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes
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